RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 EPN1Q9Y6I3 576 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 TAF6LQ9Y6J9 622 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CAPN6Q9Y6Q1 641 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 AHDC1Q5TGY3 1603 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ABCA3Q99758 1704 aa2.96□□□□□ -1.93
MDC1-208ENST00000494654 A0A1W2PQJ5 194 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CCDC162PA2VCL2 907 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 MAGEA13PA6NCF6 341 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 USP17L3A6NCW0 530 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 USP17L4A6NCW7 530 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 LRRC10BA6NIK2 292 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 A8MUI8 341 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TMEM229AB2RXF0 380 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 BTBD19C9JJ37 291 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 H0YGN5 161 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 MEN1O00255 615 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 IGF2BP3O00425 579 aaKnown RBP eCLIP2.96□□□□□ -1.94
MDC1-208ENST00000494654 ENC1O14682 589 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PJA2O43164 708 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SPINT1O43278 529 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CEP104O60308 925 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ECE2O60344 883 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SRGAP2O75044 1071 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 HIP1RO75146 1068 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ATP2C2O75185 946 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ZNF189O75820 626 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 UBOX5O94941 541 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TJP3O95049 919 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 LCA5LO95447 670 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 GJB6O95452 261 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ABL1P00519 1130 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 A1BGP04217 495 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 MMEP08473 750 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ITGA2BP08514 1039 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 KRT16P08779 473 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 HOXB7P09629 217 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 FAM200BP0CF97 657 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TPBGLP0DKB5 382 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 FDPSP14324 419 aaKnown RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 KCNA3P22001 575 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 RFX1P22670 979 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CALB2P22676 271 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TMOD1P28289 359 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ECHS1P30084 290 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 HPDP32754 393 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 KRT9P35527 623 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 HSD17B3P37058 310 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 VHLP40337 213 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 MLH1P40692 756 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PAFAH1B1P43034 410 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PTGIRP43119 386 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SERPINB4P48594 390 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TRPC1P48995 793 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PEX5P50542 639 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SCNN1DP51172 638 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 POLE2P56282 527 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 KCNJ2P63252 427 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 TNNC1P63316 161 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CLDN10P78369 228 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 HPCAP84074 193 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 EXOSC10Q01780 885 aaKnown RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 GUCY1B3Q02153 619 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 GSTM4Q03013 218 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ZNF844Q08AG5 666 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 BNIP1Q12981 228 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 USP4Q13107 963 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 LSAMPQ13449 338 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ACVR2BQ13705 512 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SPIDRQ14159 915 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PLS1Q14651 629 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 KRT31Q15323 416 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 UAP1Q16222 522 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 PKN1Q16512 942 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CLPPQ16740 277 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 GALNTL6Q49A17 601 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 FIGNQ5HY92 759 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 WASHC2DQ5SRD0 308 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 BEND3Q5T5X7 828 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SLC9C2Q5TAH2 1124 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 FOXB2Q5VYV0 432 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 RNF43Q68DV7 783 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 KLHL10Q6JEL2 608 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 KLC3Q6P597 504 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 USP17L2Q6R6M4 530 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 NCCRP1Q6ZVX7 275 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 UNC13DQ70J99 1090 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 USP17L1Q7RTZ2 530 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PRICKLE2Q7Z3G6 844 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 WAPLQ7Z5K2 1190 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 CPLX4Q7Z7G2 160 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ZNF554Q86TJ5 538 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 RSPH3Q86UC2 560 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 PNMA8AQ86V59 439 aaPredicted RBP2.96□□□□□ -1.94
MDC1-208ENST00000494654 EXOC3L1Q86VI1 746 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 VPS37DQ86XT2 251 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SEPT12Q8IYM1 358 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 ALDH16A1Q8IZ83 802 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 SPICE1Q8N0Z3 855 aa2.96□□□□□ -1.94
MDC1-208ENST00000494654 AGGF1Q8N302 714 aaeCLIP2.96□□□□□ -1.94
MDC1-208ENST00000494654 ATP11CQ8NB49 1132 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms