RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ARHGAP20Q9P2F6 1191 aa6.19□□□□□ -1.42
SMC4-224ENST00000494612 NOP58Q9Y2X3 529 aaKnown RBP6.19□□□□□ -1.42
SMC4-224ENST00000494612 ZNF839A8K0R7 811 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 ACOT7O00154 380 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 CBX4O00257 560 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 GSTA4O15217 222 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 FBXO21O94952 628 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 AMY2AP04746 511 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 AMY2BP19961 511 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 POU3F3P20264 500 aaPredicted RBP6.18□□□□□ -1.42
SMC4-224ENST00000494612 ID4P47928 161 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 GLRBP48167 497 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 SCNN1BP51168 640 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 SPIRE1Q08AE8 756 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 ABHD18Q0P651 414 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 HS1BP3Q53T59 392 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 EP400NLQ6ZTU2 488 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 LHFPL2Q6ZUX7 228 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 LMF1Q96S06 567 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 CABP5Q9NP86 173 aa6.18□□□□□ -1.42
SMC4-224ENST00000494612 THG1LQ9NWX6 298 aaKnown RBP6.18□□□□□ -1.42
SMC4-224ENST00000494612 PTPDC1A2A3K4 754 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 CDKN1CP49918 316 aaPredicted RBP6.17□□□□□ -1.42
SMC4-224ENST00000494612 FOXE3Q13461 319 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 SART3Q15020 963 aaKnown RBP6.17□□□□□ -1.42
SMC4-224ENST00000494612 FSTL4Q6MZW2 842 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 GPR155Q7Z3F1 870 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.17□□□□□ -1.42
SMC4-224ENST00000494612 ANKRD13AQ8IZ07 590 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 SH3RF2Q8TEC5 729 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 USP7Q93009 1102 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 CEP89Q96ST8 783 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 SMURF1Q9HCE7 757 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 H2AFY2Q9P0M6 372 aaPredicted RBP6.17□□□□□ -1.42
SMC4-224ENST00000494612 DSEQ9UL01 958 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 ZFR2Q9UPR6 939 aaKnown RBP6.17□□□□□ -1.42
SMC4-224ENST00000494612 ZKSCAN5Q9Y2L8 839 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 ATP8A1Q9Y2Q0 1164 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 PTPN22Q9Y2R2 807 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
SMC4-224ENST00000494612 H0Y858 1186 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 SCDO00767 359 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 PLSCR1O15162 318 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 POU3F2P20265 443 aaPredicted RBP6.16□□□□□ -1.42
SMC4-224ENST00000494612 IL2P60568 153 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 PRKD1Q15139 912 aaPredicted RBP6.16□□□□□ -1.42
SMC4-224ENST00000494612 GPR19Q15760 415 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 MIIPQ5JXC2 388 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 PRPF38AQ8NAV1 312 aaKnown RBP6.16□□□□□ -1.42
SMC4-224ENST00000494612 CHST14Q8NCH0 376 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 OR2W6PQ8NHA6 318 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 CHTF18Q8WVB6 975 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 EDAQ92838 391 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 ZNF503Q96F45 646 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 NEIL1Q96FI4 390 aaPredicted RBP6.16□□□□□ -1.42
SMC4-224ENST00000494612 LRRC37BQ96QE4 947 aa6.16□□□□□ -1.42
SMC4-224ENST00000494612 ZNF561-AS1K7EIQ3 104 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 NEMP1O14524 444 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 WNT9AO14904 365 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 GAS7O60861 476 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 ZNF888P0CJ79 500 aaPredicted RBP6.15□□□□□ -1.42
SMC4-224ENST00000494612 ATP2A2P16615 1042 aaKnown RBP6.15□□□□□ -1.42
SMC4-224ENST00000494612 CDK11BP21127 795 aaKnown RBP6.15□□□□□ -1.42
SMC4-224ENST00000494612 USP10Q14694 798 aaKnown RBP6.15□□□□□ -1.42
SMC4-224ENST00000494612 AGBL4Q5VU57 503 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 Q6ZSN1 163 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 KCTD1Q719H9 257 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 AFAP1L2Q8N4X5 818 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 B4GALT6Q9UBX8 382 aa6.15□□□□□ -1.42
SMC4-224ENST00000494612 SLC12A8A0AV02 714 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 MAN2B1O00754 1011 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 NPTXRO95502 500 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 F2P00734 622 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 SLC9A1P19634 815 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
SMC4-224ENST00000494612 LACTBP83111 547 aaPredicted RBP6.14□□□□□ -1.43
SMC4-224ENST00000494612 TMPRSS15P98073 1019 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 RNF207Q6ZRF8 634 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 RPUSD2Q8IZ73 545 aaKnown RBP6.14□□□□□ -1.43
SMC4-224ENST00000494612 GIMAP8Q8ND71 665 aaPredicted RBP6.14□□□□□ -1.43
SMC4-224ENST00000494612 ADOQ96SZ5 270 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 TACO1Q9BSH4 297 aaKnown RBP6.14□□□□□ -1.43
SMC4-224ENST00000494612 CARD11Q9BXL7 1154 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
SMC4-224ENST00000494612 PPFIA2O75334 1257 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 ZNF202O95125 648 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 FKBP9O95302 570 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 POLD1P28340 1107 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 IRF9Q00978 393 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 DSG1Q02413 1049 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
SMC4-224ENST00000494612 TOP3AQ13472 1001 aaPredicted RBP6.13□□□□□ -1.43
SMC4-224ENST00000494612 STAT4Q14765 748 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 FKBP9P1Q75LS8 142 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 IFNL2Q8IZJ0 200 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 FUKQ8N0W3 1084 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms