RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 VPS51Q9UID3 782 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 HAO1Q9UJM8 370 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 TSKSQ9UJT2 592 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 STX8Q9UNK0 236 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 TELO2Q9Y4R8 837 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 HEMK1Q9Y5R4 338 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 CLTCL1P53675 1640 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 EHBP1L1Q8N3D4 1523 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RCCD1A6NED2 376 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 TXNDC9O14530 226 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CAPN9O14815 690 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CYTH3O43739 400 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ADAM23O75077 832 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 TRPA1O75762 1119 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 KRT36O76013 467 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SEC24DO94855 1032 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 SUN1O94901 812 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 MOCS3O95396 460 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 MSL3P1P0C860 447 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CYP2C9P11712 490 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CDK4P11802 303 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SLCO1A2P46721 670 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SERPINB8P50452 374 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 TUBA1BP68363 451 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PLS1Q14651 629 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 C16orf72Q14CZ0 275 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 LRRC36Q1X8D7 754 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ERMARDQ5T6L9 678 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RESP18Q5W5W9 173 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 NEPROQ6NW34 567 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ZCCHC8Q6NZY4 707 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TUBA1AQ71U36 451 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 INTS8Q75QN2 995 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 MCF2L2Q86YR7 1114 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CREG2Q8IUH2 290 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FOXP4Q8IVH2 680 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 SMYD4Q8IYR2 804 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 FITM2Q8N6M3 262 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PAF1Q8N7H5 531 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 STKLD1Q8NE28 680 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 KCNG4Q8TDN1 519 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RPGRQ92834 1020 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 UTP4Q969X6 686 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 SKA1Q96BD8 255 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 OLFM3Q96PB7 478 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CYTH2Q99418 400 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PRPF18Q99633 342 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FHDC1Q9C0D6 1143 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 MRPL46Q9H2W6 279 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 RPAP3Q9H6T3 665 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 MLXIPQ9HAP2 919 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 IFT122Q9HBG6 1241 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 DNAJC17Q9NVM6 304 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ZMAT5Q9UDW3 170 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 PCDHGA8Q9Y5G5 932 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 NEDD4P46934 1319 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 NEXMIFQ5QGS0 1516 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FAM83GA6ND36 823 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 A8MU76 341 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 TCP11X1B4DZS4 312 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FOXD2O60548 495 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 ENO2P09104 434 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 UBL4AP11441 157 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RASA1P20936 1047 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ADCY8P40145 1251 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 MLLT3P42568 568 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 CDK7P50613 346 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CCT8P50990 548 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 HERVK_113P62684 666 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 KIF23Q02241 960 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 PPIDQ08752 370 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 ZBTB17Q13105 803 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ATP1A4Q13733 1029 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 STK11Q15831 433 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RABL6Q3YEC7 729 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 KHDC1Q4VXA5 237 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TMEM259Q4ZIN3 620 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PDCD4Q53EL6 469 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TJAP1Q5JTD0 557 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 RBM44Q6ZP01 1051 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 RFPL4BQ6ZWI9 263 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PHLDB2Q86SQ0 1253 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 CCDC125Q86Z20 511 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ANKMY2Q8IV38 441 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.35□□□□□ -1.71
ATG3-207ENST00000494571 FAM186BQ8IYM0 893 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ALDH16A1Q8IZ83 802 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 TTC39CQ8N584 583 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ANKRD42Q8N9B4 389 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 DDHD1Q8NEL9 900 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SUN5Q8TC36 379 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FNDC8Q8TC99 324 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 U2AF1L4Q8WU68 220 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 OSCP1Q8WVF1 389 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PCMTD1Q96MG8 357 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 ACAP3Q96P50 834 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms