RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 A0A087X0T9 212 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 SHTN1A0MZ66 631 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 FAM228BP0C875 321 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 EHMT1Q9H9B1 1298 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 JADE2Q9NQC1 790 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.31□□□□□ -0.92
RAF1-212ENST00000494557 NPHP1O15259 732 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 DDX3YO15523 660 aaKnown RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 STAM2O75886 525 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 PAEPP09466 180 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 RPL13P26373 211 aaKnown RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 ADAM9Q13443 819 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 TEX35Q5T0J7 233 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 C3orf20Q8ND61 904 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 MORC4Q8TE76 937 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 SPIRE2Q8WWL2 714 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 UNC45AQ9H3U1 944 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 AGO4Q9HCK5 861 aaKnown RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 ATG7O95352 703 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 FERP16591 822 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 NR2F2P24468 414 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 PTK2Q05397 1052 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 GFPT1Q06210 699 aaPredicted RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 SPA17Q15506 151 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 NT5DC3Q86UY8 548 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 LNX1Q8TBB1 728 aaPredicted RBP9.31□□□□□ -0.92
RAF1-212ENST00000494557 DBNDD1Q9H9R9 158 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 AGPAT3Q9NRZ7 376 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 ANKEF1Q9NU02 776 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 PATJQ8NI35 1801 aa9.31□□□□□ -0.92
RAF1-212ENST00000494557 IGKV6D-21A0A0A0MT36 114 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 NPHP3-ACAD11A0A0J9YXS1 232 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 MAFGO15525 162 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 GH2P01242 217 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 ITGB5P18084 799 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 KLRC1P26715 233 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 STAT3P40763 770 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
RAF1-212ENST00000494557 GBP6Q6ZN66 633 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 DYMQ7RTS9 669 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 SELENOOQ9BVL4 669 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 RGS17Q9UGC6 210 aaPredicted RBP9.3□□□□□ -0.92
RAF1-212ENST00000494557 PPME1Q9Y570 386 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 IGSF9BQ9UPX0 1349 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 TSC2P49815 1807 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 CCDC188H7C350 402 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.92
RAF1-212ENST00000494557 RIMBP2O15034 1052 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 IDEP14735 1019 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 TGFB2P61812 414 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 SPP2Q13103 211 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 AOC3Q16853 763 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 CCDC142Q17RM4 750 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 RRAGAQ7L523 313 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 PLIN2Q99541 437 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 LSM14BQ9BX40 385 aaKnown RBP9.3□□□□□ -0.92
RAF1-212ENST00000494557 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 MLXIPQ9HAP2 919 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 PARVGQ9HBI0 331 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 LUC7LQ9NQ29 371 aaKnown RBP9.3□□□□□ -0.92
RAF1-212ENST00000494557 COL20A1Q9P218 1284 aa9.3□□□□□ -0.92
RAF1-212ENST00000494557 ARMCX3Q9UH62 379 aaPredicted RBP9.3□□□□□ -0.92
RAF1-212ENST00000494557 GCOM1H8Y6P7 765 aaPredicted RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 CPP00450 1065 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 POLR2MP0CAP2 368 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 PSMC2P35998 433 aaKnown RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 FMO5P49326 533 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 SLC4A8Q2Y0W8 1093 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 UBR7Q8N806 425 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 MFSD14AQ96MC6 490 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 TMEM109Q9BVC6 243 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 NOCTQ9UK39 431 aaKnown RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 N4BP1O75113 896 aaKnown RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 KIF4AO95239 1232 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 GZMAP12544 262 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 CTNNA2P26232 953 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 ICAM3P32942 547 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 SOX5P35711 763 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 ITGB3BPQ13352 177 aaPredicted RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 CUL1Q13616 776 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 LBX2Q6XYB7 198 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 CSRNP1Q96S65 589 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 TFR2Q9UP52 801 aa9.29□□□□□ -0.92
RAF1-212ENST00000494557 ASTN2O75129 1339 aaPredicted RBP9.29□□□□□ -0.92
RAF1-212ENST00000494557 ZNF185O15231 689 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms