RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ANKRD35Q8N283 1001 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 UBASH3BQ8TF42 649 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 TRIM56Q9BRZ2 755 aaKnown RBP9.5□□□□□ -0.89
RIF1-211ENST00000494333 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 NRSN2Q9GZP1 204 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 VTI1BQ9UEU0 232 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 PFASO15067 1338 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 ZMYM6O95789 1325 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 RLFQ13129 1914 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 FBXO24O75426 580 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 TOP1P11387 765 aaKnown RBP9.49□□□□□ -0.89
RIF1-211ENST00000494333 NOVP48745 357 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 OAZ1P54368 228 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 GJC2Q5T442 439 aaPredicted RBP9.49□□□□□ -0.89
RIF1-211ENST00000494333 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 CHST13Q8NET6 341 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 TTC14Q96N46 770 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 TMEM47Q9BQJ4 181 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
RIF1-211ENST00000494333 HOMER2Q9NSB8 354 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 FBXO40Q9UH90 709 aa9.49□□□□□ -0.89
RIF1-211ENST00000494333 ZMYND8Q9ULU4 1186 aaPredicted RBP9.49□□□□□ -0.89
RIF1-211ENST00000494333 MYH8P13535 1937 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 DNM1LO00429 736 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
RIF1-211ENST00000494333 PLA2G6O60733 806 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
RIF1-211ENST00000494333 TAL1P17542 331 aaPredicted RBP9.48□□□□□ -0.89
RIF1-211ENST00000494333 SYN1P17600 705 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 SNAP25P60880 206 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 MBTPS1Q14703 1052 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 LRRC26Q2I0M4 334 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 CCDC96Q2M329 555 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 MEI1Q5TIA1 1274 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 ACAD11Q709F0 780 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 RASGRP2Q7LDG7 609 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.48□□□□□ -0.89
RIF1-211ENST00000494333 TBC1D10CQ8IV04 446 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 ESR2Q92731 530 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
RIF1-211ENST00000494333 DSCC1Q9BVC3 393 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 CNPY2Q9Y2B0 182 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 ZNF536O15090 1300 aa9.48□□□□□ -0.89
RIF1-211ENST00000494333 GREB1LQ9C091 1923 aaPredicted RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 LOC100289279A0A1B0GTE1 492 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 KBTBD13C9JR72 458 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 ALX3O95076 343 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 CYP11A1P05108 521 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 ZNF865P0CJ78 1059 aaPredicted RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 RARBP10826 455 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 ALAS1P13196 640 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 SLC16A2P36021 539 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 FXR1P51114 621 aaKnown RBP eCLIP9.47□□□□□ -0.89
RIF1-211ENST00000494333 MRPL58Q14197 206 aaKnown RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 POU4F3Q15319 338 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 IMMTQ16891 758 aaKnown RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 MAMDC4Q6UXC1 1216 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 KIAA1211Q6ZU35 1233 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 AGGF1Q8N302 714 aaeCLIP9.47□□□□□ -0.89
RIF1-211ENST00000494333 MSL3Q8N5Y2 521 aaKnown RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 DCAF4Q8WV16 495 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 CEP44Q9C0F1 390 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 ACAD9Q9H845 621 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 AKTIPQ9H8T0 292 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 FRMPD2Q68DX3 1309 aaPredicted RBP9.47□□□□□ -0.89
RIF1-211ENST00000494333 A0A0G2JMZ2 1700 aa9.47□□□□□ -0.89
RIF1-211ENST00000494333 DLGAP3O95886 979 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 PGK1P00558 417 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 PDHBP11177 359 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 AKR1A1P14550 325 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 MAOBP27338 520 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 AP3B2Q13367 1082 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 LRRC41Q15345 812 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 TKFCQ3LXA3 575 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 IQCA1Q86XH1 822 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 DGKHQ86XP1 1220 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 WFDC12Q8WWY7 111 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 CRELD1Q96HD1 420 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 IL25Q9H293 177 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 XPNPEP3Q9NQH7 507 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms