RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 NFU1Q9UMS0 254 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 CAPN6Q9Y6Q1 641 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 NKRFO15226 690 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 IFNB1P01574 187 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 GPR162Q16538 588 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 KAZNQ674X7 775 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 USP37Q86T82 979 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 FAM151AQ8WW52 585 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 AMFRQ9UKV5 643 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 DENND3A2RUS2 1198 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 TCP1P17987 556 aaKnown RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 ACTN3Q08043 901 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 PSMD2Q13200 908 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 DRAP1Q14919 205 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 GNPTABQ3T906 1256 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 NLRP4Q96MN2 994 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 FAM213AQ9BRX8 229 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 DDX47Q9H0S4 455 aaKnown RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 NXF1Q9UBU9 619 aaKnown RBP11.97□□□□□ -0.49
COL2A1-208ENST00000493991 BAIAP2L1Q9UHR4 511 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 ADAMTSL3P82987 1691 aa11.97□□□□□ -0.49
COL2A1-208ENST00000493991 NEBLO76041 1014 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 COPB2P35606 906 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 TRPC3Q13507 836 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 THNSL1Q8IYQ7 743 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 TBC1D31Q96DN5 1066 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 ASIC3Q9UHC3 531 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 C5P01031 1676 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 A0A087X0T9 212 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 WNT10BO00744 389 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 SERPING1P05155 500 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 FAM228BP0C875 321 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 OTUD6AQ7L8S5 288 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 SCFD1Q8WVM8 642 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 TMEM143Q96AN5 459 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 DCPSQ96C86 337 aaKnown RBP11.96□□□□□ -0.49
COL2A1-208ENST00000493991 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
COL2A1-208ENST00000493991 KLRC1P26715 233 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 CETN2P41208 172 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
COL2A1-208ENST00000493991 TFAMQ00059 246 aaKnown RBP11.96□□□□□ -0.5
COL2A1-208ENST00000493991 MICALCLQ6ZW33 695 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 FAM160B2Q86V87 743 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 C4orf32Q8N8J7 132 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 VTI1AQ96AJ9 217 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.5
COL2A1-208ENST00000493991 LRRC1Q9BTT6 524 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 DNAJC18Q9H819 358 aa11.96□□□□□ -0.5
COL2A1-208ENST00000493991 GAKO14976 1311 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 EMSYQ7Z589 1322 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 FANCGO15287 622 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 KLRC4O43908 158 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 SEPT7Q16181 437 aaKnown RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 NT5DC1Q5TFE4 455 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 IRF2BP1Q8IU81 584 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 PI4K2AQ9BTU6 479 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 SLC24A3Q9HC58 644 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ATRNO75882 1429 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ENTPD3O75355 529 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 AKAP3O75969 853 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ACOT2P49753 483 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 DCUN1D2Q6PH85 259 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 DAGLBQ8NCG7 672 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 CABS1Q96KC9 395 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ARHGAP20Q9P2F6 1191 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 KDM3BQ7LBC6 1761 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 UCHL3P15374 230 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 PPP2R5AQ15172 486 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 SLC30A5Q8TAD4 765 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
COL2A1-208ENST00000493991 AS3MTQ9HBK9 375 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 EXOC7Q9UPT5 735 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 IVNS1ABPQ9Y6Y0 642 aa11.95□□□□□ -0.5
COL2A1-208ENST00000493991 ESYT2A0FGR8 921 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 FGRP09769 529 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 RPA1P27694 616 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 SLCO1A2P46721 670 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 PTK2Q05397 1052 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 KRT71Q3SY84 523 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 PDXDC1Q6P996 788 aa11.94□□□□□ -0.5
COL2A1-208ENST00000493991 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms