RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ZNF215Q9UL58 517 aaPredicted RBP8.66□□□□□ -1.02
RBM39-238ENST00000493853 EMSYQ7Z589 1322 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 MCM3APO60318 1980 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 RSPH10B2B2RC85 870 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 HAS3O00219 553 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 SH2B2O14492 632 aaPredicted RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 PLEKHA8P1O95397 391 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 RSPH10BP0C881 870 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 RXRAP19793 462 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 ICAM3P32942 547 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 LIFRP42702 1097 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 WDR5P61964 334 aaKnown RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 MRPS9P82933 396 aaKnown RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 ZNF200P98182 395 aaPredicted RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 AAK1Q2M2I8 961 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 ZNF618Q5T7W0 954 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 UTP14CQ5TAP6 766 aaKnown RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 PCNX4Q63HM2 1172 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 METTL7BQ6UX53 244 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 FANCBQ8NB91 859 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 ARNTL2Q8WYA1 636 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 INPP4AQ96PE3 977 aaPredicted RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 C16orf70Q9BSU1 422 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 NIFKQ9BYG3 293 aaKnown RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 LSG1Q9H089 658 aaKnown RBP8.65□□□□□ -1.02
RBM39-238ENST00000493853 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 EHMT1Q9H9B1 1298 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
RBM39-238ENST00000493853 A6NJY4 79 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 RFXAPO00287 272 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 BACH1O14867 736 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 NBNO60934 754 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 LGR5O75473 907 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 LGALS2P05162 132 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 SMIM10L2AP0DMW4 78 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 SMIM10L2BP0DMW5 78 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 HOXD8P13378 290 aaPredicted RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 MX2P20592 715 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 FGD1P98174 961 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 TAP1Q03518 808 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 RBL2Q08999 1139 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 FAM117BQ6P1L5 589 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 HEATR3Q7Z4Q2 680 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 MICU3Q86XE3 530 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 RAB11FIP4Q86YS3 637 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 SRBD1Q8N5C6 995 aaKnown RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 DHX38Q92620 1227 aaKnown RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 NEK1Q96PY6 1258 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 ASB2Q96Q27 587 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 RAD9AQ99638 391 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 SENP7Q9BQF6 1050 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 LRRC2Q9BYS8 371 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 RNPEPQ9H4A4 650 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 SETD4Q9NVD3 440 aa8.64□□□□□ -1.03
RBM39-238ENST00000493853 NAP1L2Q9ULW6 460 aaPredicted RBP8.64□□□□□ -1.03
RBM39-238ENST00000493853 hCG_1642624A0A1W2PR95 340 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 MEIS2O14770 477 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 MAFGO15525 162 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 ATP9BO43861 1147 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 CXCL10P02778 98 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 AMHP03971 560 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 ARHGAP4P98171 946 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 BMP2KLQ5H9B9 411 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 EFHC2Q5JST6 749 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 SERINC5Q86VE9 423 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 MYOCDQ8IZQ8 938 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
RBM39-238ENST00000493853 DBF4BQ8NFT6 615 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 SEPT8Q92599 483 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 GLG1Q92896 1179 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
RBM39-238ENST00000493853 GPRASP2Q96D09 838 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 CTAGE1Q96RT6 745 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 GPR20Q99678 358 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 BCAS3Q9H6U6 928 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 RBM28Q9NW13 759 aaKnown RBP8.63□□□□□ -1.03
RBM39-238ENST00000493853 MTUS1Q9ULD2 1270 aa8.63□□□□□ -1.03
RBM39-238ENST00000493853 NRCAMQ92823 1304 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 CDK2AP1O14519 115 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TREHO43280 583 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 CAND2O75155 1236 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 GJB5O95377 273 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 CTSHP09668 335 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TCF7P36402 384 aaPredicted RBP8.62□□□□□ -1.03
RBM39-238ENST00000493853 NAPAP54920 295 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 DEFB103AP81534 67 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 MTMR1Q13613 665 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 KRT32Q14532 448 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 LBRQ14739 615 aaKnown RBP8.62□□□□□ -1.03
RBM39-238ENST00000493853 GPNMBQ14956 572 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 UBE2SQ16763 222 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms