RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CYP46A1Q9Y6A2 500 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 CPLX1O14810 134 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 MSH4O15457 936 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 GPR37L1O60883 481 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 GPR32O75388 356 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 OATP04181 439 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 TMOD1P28289 359 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 SFNP31947 248 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 LTBRP36941 435 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 GATMP50440 423 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 PRKCEQ02156 737 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 SSRP1Q08945 709 aaKnown RBP18.78■□□□□ 0.6
PTPRU-208ENST00000493601 TOB2Q14106 344 aaPredicted RBP18.78■□□□□ 0.6
PTPRU-208ENST00000493601 KLHL23Q8NBE8 558 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 AKT3Q9Y243 479 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 HCN4Q9Y3Q4 1203 aa18.78■□□□□ 0.6
PTPRU-208ENST00000493601 C9IYK1 514 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 CLCN3P51790 818 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 JAK3P52333 1124 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 ZP2Q05996 745 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 CAMK1Q14012 370 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 LRCH2Q5VUJ6 765 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
PTPRU-208ENST00000493601 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 SLC5A5Q92911 643 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 TEKT3Q9BXF9 490 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 IGFLR1Q9H665 355 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 AAASQ9NRG9 546 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 PCDHA4Q9UN74 947 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 PCDHB12Q9Y5F1 795 aa18.77■□□□□ 0.6
PTPRU-208ENST00000493601 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 CHMP2AO43633 222 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 TBX10O75333 385 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 DEXIO95424 95 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 ALADP13716 330 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 DNAJB1P25685 340 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 SPOUT1Q5T280 376 aaKnown RBP18.76■□□□□ 0.59
PTPRU-208ENST00000493601 EFCAB12Q6NXP0 572 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 CPLX2Q6PUV4 134 aaKnown RBP18.76■□□□□ 0.59
PTPRU-208ENST00000493601 ADHFE1Q8IWW8 467 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 TBCKQ8TEA7 893 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 ZNF274Q96GC6 653 aaPredicted RBP18.76■□□□□ 0.59
PTPRU-208ENST00000493601 ELAC1Q9H777 363 aaKnown RBP18.76■□□□□ 0.59
PTPRU-208ENST00000493601 ATP6V0A4Q9HBG4 840 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 C11orf16Q9NQ32 467 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
PTPRU-208ENST00000493601 FAM86C2PA6NEL3 165 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 ZNF862O60290 1169 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 GTF2F1P35269 517 aaKnown RBP eCLIP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 PLA2G5P39877 138 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 NDUFV1P49821 464 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 NLRP11P59045 1033 aaKnown RBP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 UBE3AQ05086 875 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 DLX2Q07687 328 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 SMAD4Q13485 552 aaKnown RBP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 SMAD2Q15796 467 aaKnown RBP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 CLUL1Q15846 466 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 CSPP1Q1MSJ5 1256 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 Q4G0T1 1027 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 GALNT17Q6IS24 598 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 LINC01465Q8N7H1 131 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 RDM1Q8NG50 284 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 POF1BQ8WVV4 589 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 POP1Q99575 1024 aaKnown RBP18.75■□□□□ 0.59
PTPRU-208ENST00000493601 TM6SF1Q9BZW5 370 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 UNC45AQ9H3U1 944 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 CD207Q9UJ71 328 aa18.75■□□□□ 0.59
PTPRU-208ENST00000493601 HOXA2O43364 376 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 EDIL3O43854 480 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 EIF4BP23588 611 aaKnown RBP18.74■□□□□ 0.59
PTPRU-208ENST00000493601 TBC1D8BQ0IIM8 1120 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 ADAM15Q13444 863 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 DSC3Q14574 896 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 UGCGQ16739 394 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 FAM102BQ5T8I3 360 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 DAGLBQ8NCG7 672 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 SCLT1Q96NL6 688 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
PTPRU-208ENST00000493601 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
PTPRU-208ENST00000493601 ARIH1Q9Y4X5 557 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-208ENST00000493601 CYP3A7-CYP3A51PA0A087WV96 503 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 LINC01565O15544 149 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 MBTPS2O43462 519 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 PSMD10O75832 226 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 LAG3P18627 525 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 CYP3A7P24462 503 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 IRS1P35568 1242 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 FAM189BP81408 668 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 MOXD1Q6UVY6 613 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 MIER3Q7Z3K6 550 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 ADGRD2Q7Z7M1 963 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 THNSL1Q8IYQ7 743 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 EFHBQ8N7U6 833 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 COLGALT1Q8NBJ5 622 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 FAM122AQ96E09 287 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms