RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FBF1Q8TES7 1133 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 TMEM237Q96Q45 408 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 RIOK1Q9BRS2 568 aaKnown RBP12.67□□□□□ -0.38
HDAC4-210ENST00000493582 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 GANQ9H2C0 597 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 RNPEPL1Q9HAU8 725 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 KCNK9Q9NPC2 374 aa12.67□□□□□ -0.38
HDAC4-210ENST00000493582 PVALEFA0A1B0GWK0 134 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 KIAA0391O15091 583 aaKnown RBP12.66□□□□□ -0.38
HDAC4-210ENST00000493582 RNF8O76064 485 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 GJB6O95452 261 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 EPS15P42566 896 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 PTENP60484 403 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 MRPS35P82673 323 aaKnown RBP12.66□□□□□ -0.38
HDAC4-210ENST00000493582 LONRF1Q17RB8 773 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 KIAA1755Q5JYT7 1200 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 DCAF12L1Q5VU92 463 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
HDAC4-210ENST00000493582 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 PPP1R9AQ9ULJ8 1098 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 G3BP2Q9UN86 482 aaKnown RBP12.66□□□□□ -0.38
HDAC4-210ENST00000493582 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 TSPY2A6NKD2 308 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 PEX11AO75192 247 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 ATP6V1C1P21283 382 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 SLFN11Q7Z7L1 901 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 ASB3Q9Y575 518 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 MROH5Q6ZUA9 1318 aa12.66□□□□□ -0.38
HDAC4-210ENST00000493582 FLOT1O75955 427 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 UNC5CO95185 931 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 NPTXRO95502 500 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 TPBGLP0DKB5 382 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 CYP2D6P10635 497 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 KRT13P13646 458 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 RANBP1P43487 201 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 PEX5P50542 639 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 TAOK1Q7L7X3 1001 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 CCDC25Q86WR0 208 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 WDR35Q9P2L0 1181 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 CYTH3O43739 400 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 CCNB1P14635 433 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■□□ 16.2
HDAC4-210ENST00000493582 ECHDC2Q86YB7 292 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 SUPT20HQ8NEM7 779 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
HDAC4-210ENST00000493582 UCMAQ8WVF2 138 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
HDAC4-210ENST00000493582 PRKAG3Q9UGI9 489 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 AMFRQ9UKV5 643 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
HDAC4-210ENST00000493582 WTIPA6NIX2 430 aaPredicted RBP12.65□□□□□ -0.39
HDAC4-210ENST00000493582 H2AFZP0C0S5 128 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 SP100P23497 879 aaPredicted RBP12.65□□□□□ -0.39
HDAC4-210ENST00000493582 CNGA1P29973 690 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 ALDH3A1P30838 453 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.39
HDAC4-210ENST00000493582 KLC1Q07866 573 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 KCNH2Q12809 1159 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 USP4Q13107 963 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 MPP2Q14168 576 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 ZCWPW2Q504Y3 356 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 CGB2Q6NT52 195 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 H2AFVQ71UI9 128 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 STK32AQ8WU08 396 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 GRHL1Q9NZI5 618 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 KLHL14Q9P2G3 628 aa12.65□□□□□ -0.39
HDAC4-210ENST00000493582 BAZ2AQ9UIF9 1905 aaKnown RBP12.64□□□□□ -0.39
HDAC4-210ENST00000493582 POTEMA6NI47 508 aa12.64□□□□□ -0.39
HDAC4-210ENST00000493582 RIPK2O43353 540 aa12.64□□□□□ -0.39
HDAC4-210ENST00000493582 PDE8AO60658 829 aa12.64□□□□□ -0.39
HDAC4-210ENST00000493582 FGRP09769 529 aa12.64□□□□□ -0.39
HDAC4-210ENST00000493582 PLCG2P16885 1265 aa12.64□□□□□ -0.39
HDAC4-210ENST00000493582 PTDSS1P48651 473 aaKnown RBP12.64□□□□□ -0.39
HDAC4-210ENST00000493582 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms