RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FGFR1P11362 822 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 APOBRQ0VD83 1088 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 MTMR3Q13615 1198 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 TPRNQ4KMQ1 711 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 WWC2Q6AWC2 1192 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 PDXDC2PQ6P474 469 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 FAM228AQ86W67 206 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 LRRC43Q8N309 656 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 CASP10Q92851 521 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 NECTIN4Q96NY8 510 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 OSMRQ99650 979 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 ANO3Q9BYT9 981 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 GALR2O43603 387 aaPredicted RBP20.1■□□□□ 0.81
NUP50-218ENST00000493456 CCNE2O96020 404 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 SREBF1P36956 1147 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 NAPAP54920 295 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 FOXK2Q01167 660 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 KRT17Q04695 432 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 AP3B2Q13367 1082 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 KIZQ2M2Z5 673 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 LLGL2Q6P1M3 1020 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
NUP50-218ENST00000493456 ZNF558Q96NG5 402 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 GLT8D2Q9H1C3 349 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 ZNF302Q9NR11 478 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 SORCS3Q9UPU3 1222 aa20.1■□□□□ 0.81
NUP50-218ENST00000493456 HIDE1A8MVS5 230 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 ZBTB42B2RXF5 422 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 C22orf31O95567 290 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 ADCY7P51828 1080 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 ITIH3Q06033 890 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 DSC3Q14574 896 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 CES5AQ6NT32 575 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 MIS18BP1Q6P0N0 1132 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 KCNT2Q6UVM3 1135 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 TMC7Q7Z402 723 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 SGMS1Q86VZ5 419 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 MICU3Q86XE3 530 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 ABI1Q8IZP0 508 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 KREMEN2Q8NCW0 462 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 BBXQ8WY36 941 aaPredicted RBP20.09■□□□□ 0.81
NUP50-218ENST00000493456 PGBD1Q96JS3 809 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 CASD1Q96PB1 797 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 APOL5Q9BWW9 433 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
NUP50-218ENST00000493456 CNTNAP5Q8WYK1 1306 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 H0Y858 1186 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 DDX39AO00148 427 aaKnown RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 GPR32O75388 356 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 PDGFBP01127 241 aaPredicted RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 SP100P23497 879 aaPredicted RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 ZNF76P36508 570 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 SMC1AQ14683 1233 aaKnown RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 ZNF710Q8N1W2 664 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 PPP1R16BQ96T49 567 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 ADAM7Q9H2U9 754 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
NUP50-218ENST00000493456 SPG21Q9NZD8 308 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.81
NUP50-218ENST00000493456 VTNP04004 478 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 TYW1BQ6NUM6 668 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 LRRC55Q6ZSA7 311 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 HCFC2Q9Y5Z7 792 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 PLXNA3P51805 1871 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 DCHS1Q96JQ0 3298 aa20.07■□□□□ 0.8
NUP50-218ENST00000493456 ZSCAN20P17040 1043 aaPredicted RBP20.06■□□□□ 0.8
NUP50-218ENST00000493456 MTHFRP42898 656 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 CLK2P49760 499 aaKnown RBP20.06■□□□□ 0.8
NUP50-218ENST00000493456 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 METTL13Q8N6R0 699 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 MRPL43Q8N983 215 aaKnown RBP20.06■□□□□ 0.8
NUP50-218ENST00000493456 POMKQ9H5K3 350 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 MAFBQ9Y5Q3 323 aaPredicted RBP20.06■□□□□ 0.8
NUP50-218ENST00000493456 WDR87Q6ZQQ6 2873 aa20.06■□□□□ 0.8
NUP50-218ENST00000493456 SPTBN4Q9H254 2564 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 SMCO2A6NFE2 343 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 C2CD4DB7Z1M9 353 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 IPO5O00410 1097 aaKnown RBP20.05■□□□□ 0.8
NUP50-218ENST00000493456 MAGEB2O15479 319 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 DHX15O43143 795 aaKnown RBP20.05■□□□□ 0.8
NUP50-218ENST00000493456 BRD1O95696 1058 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 ATP4AP20648 1035 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 PBX3P40426 434 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 NBL1P41271 181 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 BMS1Q14692 1282 aaKnown RBP20.05■□□□□ 0.8
NUP50-218ENST00000493456 ZNF746Q6NUN9 644 aaPredicted RBP20.05■□□□□ 0.8
NUP50-218ENST00000493456 PLA2G4DQ86XP0 818 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 ECHDC2Q86YB7 292 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
NUP50-218ENST00000493456 MAP7D2Q96T17 732 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 BARHL2Q9NY43 387 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 EVPLQ92817 2033 aa20.05■□□□□ 0.8
NUP50-218ENST00000493456 C2orf71A6NGG8 1288 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms