RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 MAGEB2O15479 319 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 CSPG5O95196 566 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 TDP2O95551 362 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 OATP04181 439 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 IL9P15248 144 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 PRKCEQ02156 737 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 Q4G0T1 1027 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 CPLX2Q6PUV4 134 aaKnown RBP25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 EP400NLQ6ZTU2 488 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 KHSRPQ92945 711 aaKnown RBP eCLIP25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 C1orf112Q9NSG2 853 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 PCDHB7Q9Y5E2 793 aa25.02■■□□□ 1.6
LYSMD4-208ENST00000493256 GRXCR2A6NFK2 248 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 C9IYK1 514 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 ITGB1P05556 798 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 SFNP31947 248 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 JAK3P52333 1124 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 HYAL1Q12794 435 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 CAMK1Q14012 370 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 EFCAB12Q6NXP0 572 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 SLC24A5Q71RS6 500 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 FAM178BQ8IXR5 827 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 LRRC71Q8N4P6 559 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 C1QTNF1Q9BXJ1 281 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 EPHX3Q9H6B9 360 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 NRBP2Q9NSY0 501 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 CLDND1Q9NY35 253 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 AKT3Q9Y243 479 aa25.01■■□□□ 1.59
LYSMD4-208ENST00000493256 FNDC1Q4ZHG4 1894 aaPredicted RBP25■■□□□ 1.59
LYSMD4-208ENST00000493256 CYP3A7-CYP3A51PA0A087WV96 503 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 PSMD10O75832 226 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 CYP3A7P24462 503 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 DNAJB1P25685 340 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 PUS10Q3MIT2 529 aaKnown RBP25■■□□□ 1.59
LYSMD4-208ENST00000493256 NAALADL2Q58DX5 795 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 FAM177A1Q8N128 213 aaPredicted RBP25■■□□□ 1.59
LYSMD4-208ENST00000493256 KLHL23Q8NBE8 558 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 ADAMTS10Q9H324 1103 aa25■■□□□ 1.59
LYSMD4-208ENST00000493256 NCK2O43639 380 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 TMOD1P28289 359 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 LTBRP36941 435 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 NLRP11P59045 1033 aaKnown RBP24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 SCRN1Q12765 414 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 DSC3Q14574 896 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 CTC1Q2NKJ3 1217 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 GALNT17Q6IS24 598 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 SPPL3Q8TCT6 385 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 MBOAT7Q96N66 472 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 MAP7D2Q96T17 732 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 RAPGEFL1Q9UHV5 662 aa24.99■■□□□ 1.59
LYSMD4-208ENST00000493256 GTF2F1P35269 517 aaKnown RBP eCLIP24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 NONOQ15233 471 aaKnown RBP eCLIP24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 FAM102BQ5T8I3 360 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 B3GNT9Q6UX72 402 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 MIER3Q7Z3K6 550 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 RDM1Q8NG50 284 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 ETNPPLQ8TBG4 499 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 KCNJ14Q9UNX9 436 aa24.98■■□□□ 1.59
LYSMD4-208ENST00000493256 TBKBP1A7MCY6 615 aa24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 FAM189BP81408 668 aa24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 MOXD1Q6UVY6 613 aa24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 GJD3Q8N144 294 aa24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 ZNF668Q96K58 619 aaPredicted RBP24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 RNF216Q9NWF9 866 aaPredicted RBP24.97■■□□□ 1.59
LYSMD4-208ENST00000493256 PLXNA4Q9HCM2 1894 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 CDKL5O76039 1030 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 FGFR1P11362 822 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 DLX2Q07687 328 aaPredicted RBP24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 TBC1D8BQ0IIM8 1120 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 TARBP2Q15633 366 aaKnown RBP24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 INF2Q27J81 1249 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 KRT25Q7Z3Z0 450 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 POF1BQ8WVV4 589 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 PHF20Q9BVI0 1012 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 SLKQ9H2G2 1235 aaPredicted RBP24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 IGFLR1Q9H665 355 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 TMEM161AQ9NX61 479 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 HCSTQ9UBK5 93 aa24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 DDX25Q9UHL0 483 aaKnown RBP24.96■■□□□ 1.59
LYSMD4-208ENST00000493256 DTNBO60941 627 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 IRS1P35568 1242 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 GPC3P51654 580 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 SPOUT1Q5T280 376 aaKnown RBP24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 ZNF710Q8N1W2 664 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 ELAC1Q9H777 363 aaKnown RBP24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 ATP6V0A4Q9HBG4 840 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 SEPT9Q9UHD8 586 aaPredicted RBP24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 TPCN1Q9ULQ1 816 aa24.95■■□□□ 1.58
LYSMD4-208ENST00000493256 STK36Q9NRP7 1315 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 TMEM150BA6NC51 233 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 LINC01565O15544 149 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 SLC37A4O43826 429 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 PFKFB2O60825 505 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 STBD1O95210 358 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 EIF4BP23588 611 aaKnown RBP24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 SSTR3P32745 418 aaPredicted RBP24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 CLUL1Q15846 466 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 ADGRD2Q7Z7M1 963 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 CEP89Q96ST8 783 aa24.94■■□□□ 1.58
LYSMD4-208ENST00000493256 NIFKQ9BYG3 293 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms