RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MTERF2Q49AM1 385 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 XKR9Q5GH70 373 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 PADI6Q6TGC4 694 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 DAW1Q8N136 415 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 CEP170P1Q96L14 293 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 TRIM9Q9C026 710 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 CUEDC2Q9H467 287 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 DHX33Q9H6R0 707 aaKnown RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 NRBP2Q9NSY0 501 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SETD4Q9NVD3 440 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 HDAC6Q9UBN7 1215 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 ZNF215Q9UL58 517 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 PHF24Q9UPV7 400 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SCN10AQ9Y5Y9 1956 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 IGKV6-21A0A0C4DH24 114 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 A0A1W2PQ45 241 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 A0A1W2PQY0 241 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 MOXD2PA6NHM9 499 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 DNM1LO00429 736 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 DKC1O60832 514 aaKnown RBP eCLIP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 CHMP4BP1P59074 171 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 DRP2Q13474 957 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 PNOCQ13519 176 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SV2BQ7L1I2 683 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 OTUD6AQ7L8S5 288 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 ELOA2Q8IYF1 753 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 SPATA20Q8TB22 786 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 LMBR1Q8WVP7 490 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 FAM167AQ96KS9 214 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 PYM1Q9BRP8 204 aaKnown RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 TNMDQ9H2S6 317 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
CSTF1-206ENST00000493039 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
CSTF1-206ENST00000493039 KLRC4O43908 158 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 ZEB2O60315 1214 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 C22orf31O95567 290 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 CACNB1Q02641 598 aaPredicted RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 DPYDQ12882 1025 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 MAPK7Q13164 816 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 GIT2Q14161 759 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 MYBPC2Q14324 1141 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 GRIK4Q16099 956 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 CNNM4Q6P4Q7 775 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 NME8Q8N427 588 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 SLC43A3Q8NBI5 491 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 DIS3LQ8TF46 1054 aaKnown RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 DDX12PQ92771 950 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 GPRC5CQ9NQ84 441 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 MBLAC1A4D2B0 266 aaPredicted RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 ARHGEF35A5YM69 484 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 RSPH10B2B2RC85 870 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 TFRCP02786 760 aaKnown RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 RSPH10BP0C881 870 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 COL6A1P12109 1028 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 IGBP1P78318 339 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 PPFIA1Q13136 1202 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
CSTF1-206ENST00000493039 DYMQ7RTS9 669 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 LINC01465Q8N7H1 131 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 REEP2Q9BRK0 252 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 YY1AP1Q9H869 796 aa10.41□□□□□ -0.74
CSTF1-206ENST00000493039 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 SFI1A8K8P3 1242 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 USO1O60763 962 aaKnown RBP10.4□□□□□ -0.74
CSTF1-206ENST00000493039 GUCY2CP25092 1073 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 KLRC1P26715 233 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 SARSP49591 514 aaKnown RBP10.4□□□□□ -0.74
CSTF1-206ENST00000493039 ITGA7Q13683 1181 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 POSTNQ15063 836 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 ZNF484Q5JVG2 852 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 GDF6Q6KF10 455 aaPredicted RBP10.4□□□□□ -0.74
CSTF1-206ENST00000493039 RBM43Q6ZSC3 357 aaKnown RBP10.4□□□□□ -0.74
CSTF1-206ENST00000493039 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 MAGEF1Q9HAY2 307 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 GTF2IRD1Q9UHL9 959 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 PCDHA5Q9Y5H7 936 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 NRCAMQ92823 1304 aa10.4□□□□□ -0.74
CSTF1-206ENST00000493039 FRMD3A2A2Y4 597 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 TREHO43280 583 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 GTPBP6O43824 516 aaPredicted RBP10.39□□□□□ -0.75
CSTF1-206ENST00000493039 DGAT1O75907 488 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 CABYRO75952 493 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 CDK7P50613 346 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 EHHADHQ08426 723 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 NT5DC1Q5TFE4 455 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 MTHFD1LQ6UB35 978 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 SESTD1Q86VW0 696 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms