RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CRYBB1P53674 252 aaPredicted RBP15.63■□□□□ 0.09
GPNMB-213ENST00000492512 FAM189BP81408 668 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
GPNMB-213ENST00000492512 KIZQ2M2Z5 673 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 CEP55Q53EZ4 464 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 KCNT2Q6UVM3 1135 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 FAM228AQ86W67 206 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 TMTC2Q8N394 836 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 TMEM105Q8N8V8 129 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 ZNF558Q96NG5 402 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 NECTIN4Q96NY8 510 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 PPP1R16BQ96T49 567 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 TMEM117Q9H0C3 514 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 POMKQ9H5K3 350 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 AGO4Q9HCK5 861 aaKnown RBP15.63■□□□□ 0.09
GPNMB-213ENST00000492512 CDH22Q9UJ99 828 aa15.63■□□□□ 0.09
GPNMB-213ENST00000492512 IGKV6D-21A0A0A0MT36 114 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 PRC1O43663 620 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 CALM1P0DP23 149 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 CALM2P0DP24 149 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 CALM3P0DP25 149 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 GSPT1P15170 499 aaKnown RBP15.62■□□□□ 0.09
GPNMB-213ENST00000492512 PBX3P40426 434 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 ITIH3Q06033 890 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 ZNF484Q5JVG2 852 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 ABI1Q8IZP0 508 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 LRRC43Q8N309 656 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 OSMRQ99650 979 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 ADAM7Q9H2U9 754 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 MFSD1Q9H3U5 465 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 SPG21Q9NZD8 308 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 HCFC2Q9Y5Z7 792 aa15.62■□□□□ 0.09
GPNMB-213ENST00000492512 DDX39AO00148 427 aaKnown RBP15.61■□□□□ 0.09
GPNMB-213ENST00000492512 CHMLP26374 656 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 CA8P35219 290 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 MTHFRP42898 656 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 SMC1AQ14683 1233 aaKnown RBP15.61■□□□□ 0.09
GPNMB-213ENST00000492512 TTC22Q5TAA0 569 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 ASTLQ6HA08 431 aaPredicted RBP15.61■□□□□ 0.09
GPNMB-213ENST00000492512 PDXDC2PQ6P474 469 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 ABHD15Q6UXT9 468 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 LRRC55Q6ZSA7 311 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 RAB11FIP4Q86YS3 637 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 CCDC60Q8IWA6 550 aaPredicted RBP15.61■□□□□ 0.09
GPNMB-213ENST00000492512 METTL13Q8N6R0 699 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 PGBD1Q96JS3 809 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 CASD1Q96PB1 797 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 ZNF302Q9NR11 478 aa15.61■□□□□ 0.09
GPNMB-213ENST00000492512 DCHS1Q96JQ0 3298 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-213ENST00000492512 CCNE2O96020 404 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 FOSP01100 380 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-213ENST00000492512 VTNP04004 478 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 MCM5P33992 734 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 ZNF76P36508 570 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 DSC3Q14574 896 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 TMTC3Q6ZXV5 915 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 CKAP2LQ8IYA6 745 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 MRPL43Q8N983 215 aaKnown RBP15.6■□□□□ 0.09
GPNMB-213ENST00000492512 NKD2Q969F2 451 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-213ENST00000492512 TMEM87BQ96K49 555 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 SMOC2Q9H3U7 446 aa15.6■□□□□ 0.09
GPNMB-213ENST00000492512 C2orf71A6NGG8 1288 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 ZBTB42B2RXF5 422 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 MEIS1O00470 390 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 SGSM2O43147 1006 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 GPR32O75388 356 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 C22orf31O95567 290 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 ASGR2P07307 311 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 ZSCAN20P17040 1043 aaPredicted RBP15.59■□□□□ 0.09
GPNMB-213ENST00000492512 NAPAP54920 295 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
GPNMB-213ENST00000492512 RARS2Q5T160 578 aaKnown RBP15.59■□□□□ 0.09
GPNMB-213ENST00000492512 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 SWSAP1Q6NVH7 229 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 MIS18BP1Q6P0N0 1132 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 FRMD5Q7Z6J6 570 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 TDRD5Q8NAT2 981 aaKnown RBP15.59■□□□□ 0.09
GPNMB-213ENST00000492512 RNF169Q8NCN4 708 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 MAP4K1Q92918 833 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 ANO3Q9BYT9 981 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 RIC8AQ9NPQ8 531 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 RNF19AQ9NV58 838 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 LIMD1Q9UGP4 676 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 RBM8AQ9Y5S9 174 aaKnown RBP15.59■□□□□ 0.09
GPNMB-213ENST00000492512 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
GPNMB-213ENST00000492512 CLASP2O75122 1294 aaKnown RBP15.58■□□□□ 0.08
GPNMB-213ENST00000492512 WEE2P0C1S8 567 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 LIFRP42702 1097 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 CLCN5P51795 746 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 WWC2Q6AWC2 1192 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 ERMP1Q7Z2K6 904 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 TRMT1LQ7Z2T5 733 aaKnown RBP15.58■□□□□ 0.08
GPNMB-213ENST00000492512 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 ZDHHC14Q8IZN3 488 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 SLC39A11Q8N1S5 342 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 FANCBQ8NB91 859 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 TMEM87AQ8NBN3 555 aa15.58■□□□□ 0.08
GPNMB-213ENST00000492512 DBR1Q9UK59 544 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms