RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SQORQ9Y6N5 450 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 SPTBN5Q9NRC6 3674 aaKnown RBP8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
PDLIM1-204ENST00000492511 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 POTEMA6NI47 508 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 MGEA5O60502 916 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 EFCAB14O75071 495 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 LYPLA2O95372 231 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 GJB5O95377 273 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 RPLP2P05387 115 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 OR52Z1P0C646 297 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 YWHABP31946 246 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 TECP42680 631 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 KCNJ6P48051 423 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 CYP4A11Q02928 519 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 ORC2Q13416 577 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 RAB30Q15771 203 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 KIZQ2M2Z5 673 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 TMEM266Q2M3C6 531 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 TPH2Q8IWU9 490 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 MAFAQ8NHW3 353 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 APBB2Q92870 758 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 TOP1MTQ969P6 601 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 SNX21Q969T3 373 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 ZNF668Q96K58 619 aaPredicted RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 ZSWIM4Q9H7M6 989 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 ERVK-5Q9HDB9 667 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 CYP26B1Q9NR63 512 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 MSRAQ9UJ68 235 aa8.06□□□□□ -1.12
PDLIM1-204ENST00000492511 EPOPA6NHQ4 379 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 TLL1O43897 1013 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 MED24O75448 989 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 CA3P07451 260 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 FOSL2P15408 326 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 GPC3P51654 580 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 CRYBB1P53674 252 aaPredicted RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 NLRP11P59045 1033 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 HTRA4P83105 476 aaPredicted RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 TAP1Q03518 808 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 TBC1D8BQ0IIM8 1120 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 PTGDRQ13258 359 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 GNL2Q13823 731 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 ECM1Q16610 540 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 MCTP1Q6DN14 999 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 FAM228AQ86W67 206 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 CATSPER3Q86XQ3 398 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 KSR1Q8IVT5 923 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 MYOCDQ8IZQ8 938 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 USP38Q8NB14 1042 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 MYLIPQ8WY64 445 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 INTS4Q96HW7 963 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 CEP170P1Q96L14 293 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 RAD9AQ99638 391 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 OSMRQ99650 979 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 PRDM6Q9NQX0 595 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 NOL7Q9UMY1 257 aaKnown RBP8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 ST3GAL5Q9UNP4 418 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 AKT3Q9Y243 479 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 GINS2Q9Y248 185 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 KIF3AQ9Y496 699 aa8.05□□□□□ -1.12
PDLIM1-204ENST00000492511 H3BQV1 296 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 M0QZ92 97 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 RFXAPO00287 272 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 DKC1O60832 514 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 RPS6KA5O75582 802 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 UPP2O95045 317 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 AMHP03971 560 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 SYT1P21579 422 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 FGFR4P22455 802 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 EIF4BP23588 611 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 TMOD1P28289 359 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 FXR2P51116 673 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 PAK2Q13177 524 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 DSC3Q14574 896 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 PPP2R2DQ66LE6 453 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 IGSF22Q8N9C0 903 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 NEK9Q8TD19 979 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 PIGOQ8TEQ8 1089 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 TMEM143Q96AN5 459 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 POLR3CQ9BUI4 534 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 PRDM12Q9H4Q4 367 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 CERS4Q9HA82 394 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 SLC28A3Q9HAS3 691 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 RC3H2Q9HBD1 1191 aaKnown RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 XPNPEP1Q9NQW7 623 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 FOXD4L1Q9NU39 408 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 SUCLA2Q9P2R7 463 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 PPME1Q9Y570 386 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 TRANK1O15050 2925 aa8.04□□□□□ -1.12
PDLIM1-204ENST00000492511 SIP14410 1827 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms