RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 MAN2B1O00754 1011 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 CHGBP05060 677 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 ZBTB48P10074 688 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 ACRV1P26436 265 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 DNM2P50570 870 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 SEC23AQ15436 765 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 SMAD2Q15796 467 aaKnown RBP4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 CFAP100Q494V2 611 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 STEAP3Q658P3 488 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 VASNQ6EMK4 673 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 LHFPL2Q6ZUX7 228 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 GPR155Q7Z3F1 870 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 OSTM1Q86WC4 334 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 REXO1L1PQ8IX06 675 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 UHMK1Q8TAS1 419 aaKnown RBP4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 CACTINQ8WUQ7 758 aaKnown RBP4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 CHAC2Q8WUX2 184 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 AGAP2Q99490 1192 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 TMX1Q9H3N1 280 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 SLC6A20Q9NP91 592 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 DVL2O14641 736 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 KCNK3O14649 394 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 MAFKO60675 156 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 KLHL18O94889 574 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 NPTXRO95502 500 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 F2P00734 622 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 LTFP02788 710 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 GNAT1P11488 350 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 BPIP17213 487 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 CDKN1CP49918 316 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 NEK4P51957 841 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 USP10Q14694 798 aaKnown RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 TAF7LQ5H9L4 462 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 ARHGAP36Q6ZRI8 547 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 DDX53Q86TM3 631 aaKnown RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 PTRH1Q86Y79 214 aaKnown RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 NOSTRINQ8IVI9 506 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 RBM12BQ8IXT5 1001 aaKnown RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 NXPE1Q8N323 547 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 CHST14Q8NCH0 376 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 ARRDC4Q8NCT1 418 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 LEO1Q8WVC0 666 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 LARP4BQ92615 738 aaKnown RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 AJUBAQ96IF1 538 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 WNK4Q96J92 1243 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 CD244Q9BZW8 370 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 AURKAIP1Q9NWT8 199 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 B4GALT6Q9UBX8 382 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 SRPK3Q9UPE1 567 aa4.13□□□□□ -1.75
HMGB1P30-201ENST00000492455 TCRBV5S2A0A599 114 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 DGKIO75912 1065 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 LRG1P02750 347 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 ATP2A2P16615 1042 aaKnown RBP4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 BMP5P22003 454 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 CSF2RBP32927 897 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 ADCYAP1R1P41586 468 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 ID4P47928 161 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 EPHA5P54756 1037 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 MRPS21P82921 87 aaKnown RBP4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 DHCR24Q15392 516 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 GPR19Q15760 415 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 CCDC142Q17RM4 750 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 FAM47CQ5HY64 1035 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 KIF18BQ86Y91 864 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 SMC1BQ8NDV3 1235 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 CLEC4DQ8WXI8 215 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 OR14A2Q96R54 314 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 PDGFDQ9GZP0 370 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 CATSPERZQ9NTU4 200 aa4.12□□□□□ -1.75
HMGB1P30-201ENST00000492455 PTPDC1A2A3K4 754 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 NEMP1O14524 444 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 SLC27A2O14975 620 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 COL6A1P12109 1028 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 KRT15P19012 456 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 CR2P20023 1033 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 SOX5P35711 763 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 FLT3P36888 993 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 IL12RB1P42701 662 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 ST5P78524 1137 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 SPIRE1Q08AE8 756 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 CRY1Q16526 586 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 CYP4F22Q6NT55 531 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 UBE2R2Q712K3 238 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 DDX42Q86XP3 938 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 AHI1Q8N157 1196 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 PRPF38AQ8NAV1 312 aaKnown RBP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 PHOSPHO1Q8TCT1 267 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 STAG1Q8WVM7 1258 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 DLG3Q92796 817 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 PUS7Q96PZ0 661 aaKnown RBP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 SMOC1Q9H4F8 434 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 H2AFY2Q9P0M6 372 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 MYOTQ9UBF9 498 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 ASH2LQ9UBL3 628 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 DSEQ9UL01 958 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 OAZ3Q9UMX2 235 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 ATP8A1Q9Y2Q0 1164 aa4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 NOP58Q9Y2X3 529 aaKnown RBP4.11□□□□□ -1.75
HMGB1P30-201ENST00000492455 SLC30A1Q9Y6M5 507 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms