RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 C1orf186Q6ZWK4 172 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 AP1M1Q9BXS5 423 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 SUCLA2Q9P2R7 463 aaPredicted RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 GFPT2O94808 682 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 SLITRK3O94933 977 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 ATP1A2P50993 1020 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 FKBP1AP62942 108 aaKnown RBP17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 CUL1Q13616 776 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 RRP1BQ14684 758 aaKnown RBP17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 NFIL3Q16649 462 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 PEX26Q7Z412 305 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 FAM186BQ8IYM0 893 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 SLC30A5Q8TAD4 765 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 LNX1Q8TBB1 728 aaPredicted RBP17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 U2AF1L4Q8WU68 220 aaKnown RBP17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 PRR12Q9ULL5 1215 aa17.58■□□□□ 0.41
SEMA4D-220ENST00000492386 A0A1W2PRG0 241 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 EBAG9O00559 213 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 FAM13AO94988 1023 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 GH2P01242 217 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 RASGEF1CQ8N431 466 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 TUFT1Q9NNX1 390 aa17.58■□□□□ 0.4
SEMA4D-220ENST00000492386 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 ZBTB39O15060 712 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 EVI5O60447 810 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 PSMD10O75832 226 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 PSMC2P35998 433 aaKnown RBP17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 STAT1P42224 750 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 NPEPPSP55786 919 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 NT5DC3Q86UY8 548 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 TPH2Q8IWU9 490 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 EFCAB13Q8IY85 973 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 MYCT1Q8N699 235 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 DYDC2Q96IM9 177 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 ATP6V1G3Q96LB4 118 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 FIZ1Q96SL8 496 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 PLAAQ9Y263 795 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 AFF2P51816 1311 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 ATRNL1Q5VV63 1379 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 F8VZ95 297 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 SOX5P35711 763 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 PDE6BP35913 854 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 GALCP54803 685 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 HLTFQ14527 1009 aaKnown RBP eCLIP17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 COG2Q14746 738 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 SPICE1Q8N0Z3 855 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 MASTLQ96GX5 879 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 HES6Q96HZ4 224 aa17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 DDX47Q9H0S4 455 aaKnown RBP17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 TMX4Q9H1E5 349 aaPredicted RBP17.57■□□□□ 0.4
SEMA4D-220ENST00000492386 CCDC188H7C350 402 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 ITGA4P13612 1032 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 FMO5P49326 533 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 DAAM2Q86T65 1068 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 DDX42Q86XP3 938 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 SYCE1Q8N0S2 351 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 NLGN1Q8N2Q7 840 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 PPM1EQ8WY54 764 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 FAM107BQ9H098 131 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 NEUROG2Q9H2A3 272 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
SEMA4D-220ENST00000492386 KRIT1O00522 736 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 TRIM37O94972 964 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 NR1D1P20393 614 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 HSD17B3P37058 310 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 PPP2R5CQ13362 524 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 RBM26Q5T8P6 1007 aaKnown RBP17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 STK33Q9BYT3 514 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 MYH11P35749 1972 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 HMGB1P1B2RPK0 211 aaPredicted RBP17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 H0YGN5 161 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 CHMP2AO43633 222 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 ECE2O60344 883 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 ZNF131P52739 623 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 UAP1Q16222 522 aaPredicted RBP17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 MEX3CQ5U5Q3 659 aaKnown RBP17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 LRIG3Q6UXM1 1119 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 PACS2Q86VP3 889 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 GPR88Q9GZN0 384 aa17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
SEMA4D-220ENST00000492386 NFS1Q9Y697 457 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms