RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ATP1A3P13637 1013 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 HSD3B1P14060 373 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 RAC2P15153 192 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NAT1P18440 290 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CAPN3P20807 821 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 COL9A1P20849 921 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SFPQP23246 707 aaKnown RBP eCLIP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TM4SF1P30408 202 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 HIBADHP31937 336 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 L1CAMP32004 1257 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CTNNA1P35221 906 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CHKAP35790 457 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 KRT2P35908 639 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CCNFP41002 786 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ECE1P42892 770 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ZNF132P52740 706 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 UBASH3AP57075 661 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TMPRSS15P98073 1019 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ATP2C1P98194 919 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 PFKPQ01813 784 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 MECOMQ03112 1051 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 PDE4BQ07343 736 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NCBP1Q09161 790 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NR5A1Q13285 461 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SEZ6Q53EL9 994 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CCDC178Q5BJE1 867 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SNAP47Q5SQN1 464 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 E4F1Q66K89 784 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 HEATR6Q6AI08 1181 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ITPRIPL1Q6GPH6 555 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TMCO3Q6UWJ1 677 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TPTE2Q6XPS3 522 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 C15orf52Q6ZUT6 534 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 GALNT5Q7Z7M9 940 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SAMD14Q8IZD0 417 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 AHI1Q8N157 1196 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 FAM26EQ8N5C1 309 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 KCT2Q8NC54 265 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 KIF18AQ8NI77 898 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 COG1Q8WTW3 980 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DDX1Q92499 740 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DPF2Q92785 391 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 N4BP2L2Q92802 583 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SMARCE1Q969G3 411 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NLRP3Q96P20 1036 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NUDT16L1Q9BRJ7 211 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 PYM1Q9BRP8 204 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 NAA15Q9BXJ9 866 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 MRPL9Q9BYD2 267 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 BCO2Q9BYV7 579 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 L2HGDHQ9H9P8 463 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DBNDD1Q9H9R9 158 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 BRMS1Q9HCU9 246 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ZCCHC17Q9NP64 241 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ALG13Q9NP73 1137 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 CABP5Q9NP86 173 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 OSGEPQ9NPF4 335 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DCP1AQ9NPI6 582 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ANKEF1Q9NU02 776 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TBC1D22BQ9NU19 505 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TCP11L1Q9NUJ3 509 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 TRMT13Q9NUP7 481 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 INTS13Q9NVM9 706 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 VPS54Q9P1Q0 977 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ARPP21Q9UBL0 812 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SERTAD1Q9UHV2 236 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 PNMA8BQ9ULN7 279 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ANKRD6Q9Y2G4 727 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 SCN7AQ01118 1682 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 DUOX1Q9NRD9 1551 aa4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 MYO5AQ9Y4I1 1855 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-206ENST00000492233 ROBO3Q96MS0 1386 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 CYP2D7A0A087X1C5 515 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 A0A1B0GTH6 734 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 IQCA1LA6NCM1 817 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 FAM205CA6NFA0 338 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 ERICH4A6NGS2 130 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 FAM155AB1AL88 458 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 MPHOSPH10O00566 681 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 PLD2O14939 933 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 ARHGAP6O43182 974 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 BRINP1O60477 761 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 PLOD3O60568 738 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 TLR5O60602 858 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 SERPINC1P01008 464 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 MYCP01106 439 aaPredicted RBP4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 PF4P02776 101 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 TOP1P11387 765 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 SCG2P13521 617 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 GARTP22102 1010 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 GRK2P25098 689 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 KLRK1P26718 216 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 CYP2C19P33261 490 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 HOXD12P35452 270 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 GNAQP50148 359 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 PLCD1P51178 756 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 NAP1L1P55209 391 aaKnown RBP4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 LMNB2Q03252 620 aa4.17□□□□□ -1.74
ATPAF1-206ENST00000492233 CUL4BQ13620 913 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms