RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 FAM126AQ9BYI3 521 aaPredicted RBP5.41□□□□□ -1.54
VTA1-204ENST00000491881 PDGFDQ9GZP0 370 aaPredicted RBP5.41□□□□□ -1.54
VTA1-204ENST00000491881 TMEM168Q9H0V1 697 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 ACSS2Q9NR19 701 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 TOMM22Q9NS69 142 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 ARHGAP28Q9P2N2 729 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 TCAF1Q9Y4C2 921 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 FOXP2O15409 715 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 C4BPAP04003 597 aaKnown RBP5.4□□□□□ -1.54
VTA1-204ENST00000491881 CYP17A1P05093 508 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 SLC9A1P19634 815 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 POU3F3P20264 500 aaPredicted RBP5.4□□□□□ -1.54
VTA1-204ENST00000491881 CDK11BP21127 795 aaKnown RBP5.4□□□□□ -1.54
VTA1-204ENST00000491881 SELENOPP49908 381 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 PPP2CBP62714 309 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 PPP2CAP67775 309 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 ADAM9Q13443 819 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 STAT4Q14765 748 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 SEC23AQ15436 765 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 VASNQ6EMK4 673 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 CC2D1AQ6P1N0 951 aaPredicted RBP5.4□□□□□ -1.54
VTA1-204ENST00000491881 DNERQ8NFT8 737 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 IGDCC4Q8TDY8 1250 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 DLG3Q92796 817 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 EMC7Q9NPA0 242 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 SPTLC3Q9NUV7 552 aa5.4□□□□□ -1.54
VTA1-204ENST00000491881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 ACOT7O00154 380 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 DVL2O14641 736 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 MUSKO15146 869 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 EYA4O95677 639 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 LRG1P02750 347 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 MMEP08473 750 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 IL13P35225 146 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 ID4P47928 161 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 HERVK_113P62684 666 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 KLF10Q13118 480 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 DDB1Q16531 1140 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 CR1LQ2VPA4 569 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 RNF219Q5W0B1 726 aaPredicted RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 HDGFL2Q7Z4V5 671 aaPredicted RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 SPATS2Q86XZ4 545 aaKnown RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 PRPF38AQ8NAV1 312 aaKnown RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 ZSWIM3Q96MP5 696 aa5.39□□□□□ -1.55
VTA1-204ENST00000491881 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
VTA1-204ENST00000491881 GPR39O43194 453 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 RAB11FIP3O75154 756 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 ULK1O75385 1050 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 CYP7B1O75881 506 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 PTX3P26022 381 aaPredicted RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 SDHAP31040 664 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 FNTBP49356 437 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 CDKN1CP49918 316 aaPredicted RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 EPHB4P54760 987 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 CATSPEREQ5SY80 951 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 CD276Q5ZPR3 534 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 IQSEC1Q6DN90 963 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 TMC5Q6UXY8 1006 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 KBTBD2Q8IY47 623 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 ZZZ3Q8IYH5 903 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 ASB15Q8WXK1 588 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 ERCC4Q92889 916 aaPredicted RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 YTHDC1Q96MU7 727 aaKnown RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 GBP4Q96PP9 640 aa5.38□□□□□ -1.55
VTA1-204ENST00000491881 PUS7Q96PZ0 661 aaKnown RBP5.38□□□□□ -1.55
VTA1-204ENST00000491881 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 B4GALT4O60513 344 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 CD40P25942 277 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 LSP1P33241 339 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 FAM50AQ14320 339 aaKnown RBP5.37□□□□□ -1.55
VTA1-204ENST00000491881 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 LHFPL2Q6ZUX7 228 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 NECAB2Q7Z6G3 386 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 NME9Q86XW9 330 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 SLC5A5Q92911 643 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 TMEM209Q96SK2 561 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 SEMA4AQ9H3S1 761 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 HOMER2Q9NSB8 354 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 HSPBP1Q9NZL4 362 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 RBPJLQ9UBG7 517 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 CROTQ9UKG9 612 aa5.37□□□□□ -1.55
VTA1-204ENST00000491881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.36□□□□□ -1.55
VTA1-204ENST00000491881 RASSF10A6NK89 507 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 PATE3B3GLJ2 98 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 TGM5O43548 720 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 ZNF623O75123 536 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 PTGS1P23219 599 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 AOAHP28039 575 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 GUCY2FP51841 1108 aa5.36□□□□□ -1.55
VTA1-204ENST00000491881 MLLT6P55198 1093 aaPredicted RBP5.36□□□□□ -1.55
VTA1-204ENST00000491881 SESN3P58005 492 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms