RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 KCNMB3Q9NPA1 279 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 VAV3Q9UKW4 847 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 GINS2Q9Y248 185 aa14.31□□□□□ -0.12
SEC61A1-206ENST00000491668 RALGAPA2Q2PPJ7 1873 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 H3BNC9 293 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 JAK2O60674 1132 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 SFNP31947 248 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 GATMP50440 423 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 JAK3P52333 1124 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 DRP2Q13474 957 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 BECN1Q14457 450 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 SKIV2LQ15477 1246 aaKnown RBP14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 LRRC71Q8N4P6 559 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 FIBCD1Q8N539 461 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 METTL13Q8N6R0 699 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 HAS1Q92839 578 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 CLP1Q92989 425 aaKnown RBP14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 FAM167AQ96KS9 214 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 OSMRQ99650 979 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 FTHL17Q9BXU8 183 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 ATG2AQ2TAZ0 1938 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 ADGRA3Q8IWK6 1321 aa14.3□□□□□ -0.12
SEC61A1-206ENST00000491668 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 CRYBB1P53674 252 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 NR5A1Q13285 461 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 LETM2Q2VYF4 491 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 PPP4R3AQ6IN85 833 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 EFCAB12Q6NXP0 572 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 PIK3AP1Q6ZUJ8 805 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 FAM228AQ86W67 206 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 RDM1Q8NG50 284 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 ADAMTS19Q8TE59 1207 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 SYMPKQ92797 1274 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 MRPL38Q96DV4 380 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 SAMD11Q96NU1 681 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 NECAB3Q96P71 396 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 SH2D3AQ9BRG2 576 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 NIFKQ9BYG3 293 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
SEC61A1-206ENST00000491668 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 C5orf67F2Z3F1 127 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 WNT7AO00755 349 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 GRM6O15303 877 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 MAGEB2O15479 319 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 BMPR1AP36894 532 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 GPM6BQ13491 265 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 DSC3Q14574 896 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 NPAS4Q8IUM7 802 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 LLPHQ9BRT6 129 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 KIAA1671Q9BY89 1806 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 WRAP73Q9P2S5 460 aaPredicted RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 DAXXQ9UER7 740 aaPredicted RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 MRPL42Q9Y6G3 142 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-206ENST00000491668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 IGKV6-21A0A0C4DH24 114 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 C9IYK1 514 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 CTNNB1P35222 781 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 SARSP49591 514 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 PPP2R5CQ13362 524 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 CAMK1Q14012 370 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 ANO5Q75V66 913 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 CMTR2Q8IYT2 770 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 BANK1Q8NDB2 785 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 WASF1Q92558 559 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 HLA-CQ95604 372 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 ADAM2Q99965 735 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 RGS18Q9NS28 235 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 COG5Q9UP83 839 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 C5orf42Q9H799 3197 aa14.27□□□□□ -0.13
SEC61A1-206ENST00000491668 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 XBP1P17861 261 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 GPC3P51654 580 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 FAM189BP81408 668 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 COL19A1Q14993 1142 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 PAN2Q504Q3 1202 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 XKR3Q5GH77 459 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 FAM102BQ5T8I3 360 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 HCSTQ9UBK5 93 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 SEPT9Q9UHD8 586 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms