RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PROS1P07225 676 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 AOC1P19801 751 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 KIF5BP33176 963 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 GATMP50440 423 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 TMEM62Q0P6H9 643 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 WTAPQ15007 396 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 SPEGQ15772 3267 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 LLGL2Q6P1M3 1020 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 PLPPR4Q7Z2D5 763 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 ADAM2Q99965 735 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 TMX1Q9H3N1 280 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 JPH1Q9HDC5 661 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 TMEM161AQ9NX61 479 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 NCDNQ9UBB6 729 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 TELO2Q9Y4R8 837 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 MEIS2O14770 477 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 GNAQP50148 359 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 STAT5BP51692 787 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 RBM10P98175 930 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 TROAPQ12815 778 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 TMC7Q7Z402 723 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 RALYLQ86SE5 291 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 JADE2Q9NQC1 790 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 DZANK1Q9NVP4 752 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 UBIAD1Q9Y5Z9 338 aa12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-206ENST00000491433 COL1A2P08123 1366 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 NFASCO94856 1347 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 C2CD4DB7Z1M9 353 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 C9IYK1 514 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 HBP1O60381 514 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 ITGB5P18084 799 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 SP100P23497 879 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 PLCB4Q15147 1175 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 TMEM266Q2M3C6 531 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 CWF19L1Q69YN2 538 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 LRRC43Q8N309 656 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 CWH43Q9H720 699 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 PSTPIP2Q9H939 334 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 GINS2Q9Y248 185 aa12.73□□□□□ -0.37
CLCNKA-206ENST00000491433 PDE4AP27815 886 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 FAM189BP81408 668 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 GIT2Q14161 759 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 FAM102BQ5T8I3 360 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 RSPH1Q8WYR4 309 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 PCYT2Q99447 389 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
CLCNKA-206ENST00000491433 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 PI15O43692 258 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 MGEA5O60502 916 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 DDAH1O94760 285 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 KLRC1P26715 233 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 ACTR2P61160 394 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 APOBRQ0VD83 1088 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 ZNF484Q5JVG2 852 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms