RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 CDHR5Q9HBB8 845 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ERVK-5Q9HDB9 667 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 DDX25Q9UHL0 483 aaKnown RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ST3GAL5Q9UNP4 418 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 AKT3Q9Y243 479 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 RB1P06400 928 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 LINC00271P0C7V0 271 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 SARSP49591 514 aaKnown RBP9.31□□□□□ -0.92
LSM2-213ENST00000491421 TBC1D8BQ0IIM8 1120 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 LETM2Q2VYF4 491 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 PAN2Q504Q3 1202 aaKnown RBP9.31□□□□□ -0.92
LSM2-213ENST00000491421 EFCAB12Q6NXP0 572 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 NEK8Q86SG6 692 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 CMTR2Q8IYT2 770 aaKnown RBP9.31□□□□□ -0.92
LSM2-213ENST00000491421 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 LRRC71Q8N4P6 559 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 BANK1Q8NDB2 785 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 ETNPPLQ8TBG4 499 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 WASF1Q92558 559 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
LSM2-213ENST00000491421 MBOAT7Q96N66 472 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 SCLT1Q96NL6 688 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 ADAM2Q99965 735 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 C1orf112Q9NSG2 853 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 PCDHB7Q9Y5E2 793 aa9.31□□□□□ -0.92
LSM2-213ENST00000491421 MRPL42Q9Y6G3 142 aaKnown RBP9.31□□□□□ -0.92
LSM2-213ENST00000491421 BDP1A6H8Y1 2624 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 GRM6O15303 877 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 SLC37A4O43826 429 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 MGEA5O60502 916 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 DTNBO60941 627 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 GPR32O75388 356 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 CTDNEP1O95476 244 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 CENPBP07199 599 aaPredicted RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 GCFC2P16383 781 aaKnown RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 KCNA5P22460 613 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 GATMP50440 423 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 NLRP11P59045 1033 aaKnown RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 C1QBPQ07021 282 aaKnown RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 XKR3Q5GH77 459 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 TCEAL5Q5H9L2 206 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 SLC24A5Q71RS6 500 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 FAM228AQ86W67 206 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 LINC01465Q8N7H1 131 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 NECAB1Q8N987 351 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 LMAN2LQ9H0V9 348 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 ADAMTS10Q9H324 1103 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 NSUN3Q9H649 340 aaKnown RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 RGS18Q9NS28 235 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 GJB4Q9NTQ9 266 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
LSM2-213ENST00000491421 SIP14410 1827 aa9.3□□□□□ -0.92
LSM2-213ENST00000491421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 C9IYK1 514 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 MARCH6O60337 910 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 CCNT1O60563 726 aaKnown RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 CSPG5O95196 566 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 LARGE1O95461 756 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 MMP1P03956 469 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 NEK4P51957 841 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 TARBP2Q15633 366 aaKnown RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 ME3Q16798 604 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 LEXMQ3ZCV2 418 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 MTERF2Q49AM1 385 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 PPP4R3AQ6IN85 833 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 B3GNT9Q6UX72 402 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 EP400NLQ6ZTU2 488 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 GTF3C6Q969F1 213 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 FAM20AQ96MK3 541 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 NAP1L4Q99733 375 aaKnown RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 NIFKQ9BYG3 293 aaKnown RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 ATP6V0A4Q9HBG4 840 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 BRMS1Q9HCU9 246 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
LSM2-213ENST00000491421 KCNMB3Q9NPA1 279 aa9.29□□□□□ -0.92
LSM2-213ENST00000491421 KAT6AQ92794 2004 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 TMEM150BA6NC51 233 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 EML1O00423 815 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 TBX3O15119 743 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 ITGB1P05556 798 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 FDPSP14324 419 aaKnown RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 DARSP14868 501 aaKnown RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 EIF4BP23588 611 aaKnown RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 KRT2P35908 639 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 DNM2P50570 870 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 GPC3P51654 580 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms