RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CTC1Q2NKJ3 1217 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 PUS10Q3MIT2 529 aaKnown RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 GJD3Q8N144 294 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 LRRC71Q8N4P6 559 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 KLHL23Q8NBE8 558 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 SLC5A5Q92911 643 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 LRFN3Q9BTN0 628 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 UNC45AQ9H3U1 944 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 C11orf16Q9NQ32 467 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 RGS18Q9NS28 235 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 C1orf112Q9NSG2 853 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 PCDHB7Q9Y5E2 793 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 C9IYK1 514 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 CPLX1O14810 134 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 GPR182O15218 404 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 LINC01565O15544 149 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 USP11P51784 963 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 CLUL1Q15846 466 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 ODR4Q5SWX8 454 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 FAM102BQ5T8I3 360 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 LRCH2Q5VUJ6 765 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 SPPL3Q8TCT6 385 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 RIT2Q99578 217 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 TEKT3Q9BXF9 490 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 IGFLR1Q9H665 355 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 AKT3Q9Y243 479 aa17.75■□□□□ 0.43
SMPD4-220ENST00000491319 FAM86C2PA6NEL3 165 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 M0R2N6 131 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 MAGEB2O15479 319 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 NCK2O43639 380 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 DEXIO95424 95 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 TDP2O95551 362 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 IRS1P35568 1242 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 NLRP11P59045 1033 aaKnown RBP17.74■□□□□ 0.43
SMPD4-220ENST00000491319 NPY5RQ15761 445 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 NAALADL2Q58DX5 795 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 TMEM31Q5JXX7 168 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 EFCAB12Q6NXP0 572 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 SLC24A5Q71RS6 500 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 ADGRD2Q7Z7M1 963 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-220ENST00000491319 ZNF668Q96K58 619 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-220ENST00000491319 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
SMPD4-220ENST00000491319 PI4K2BG5E9Z4 385 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 PSMD10O75832 226 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 SFNP31947 248 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 JAK3P52333 1124 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 ZP2Q05996 745 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 DSC3Q14574 896 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 Q4G0T1 1027 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 SPOUT1Q5T280 376 aaKnown RBP17.73■□□□□ 0.43
SMPD4-220ENST00000491319 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 DAGLBQ8NCG7 672 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 POF1BQ8WVV4 589 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
SMPD4-220ENST00000491319 FGFR1P11362 822 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 FAM43BQ6ZT52 329 aaPredicted RBP17.72■□□□□ 0.43
SMPD4-220ENST00000491319 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 ADAMTS10Q9H324 1103 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 NRBP2Q9NSY0 501 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
SMPD4-220ENST00000491319 CYP3A7-CYP3A51PA0A087WV96 503 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 TMEM150BA6NC51 233 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 MBTPS2O43462 519 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 CYP3A7P24462 503 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 TMOD1P28289 359 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 GPC3P51654 580 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 TBC1D8BQ0IIM8 1120 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 ETNPPLQ8TBG4 499 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 PPP2R3CQ969Q6 453 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 ATP6V0A4Q9HBG4 840 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-220ENST00000491319 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 SEPT9Q9UHD8 586 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-220ENST00000491319 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 PCDHB12Q9Y5F1 795 aa17.71■□□□□ 0.43
SMPD4-220ENST00000491319 GPR37L1O60883 481 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 DTNBO60941 627 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 EIF4BP23588 611 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 NDUFV1P49821 464 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 FAM189BP81408 668 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SCRN1Q12765 414 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 ADAM15Q13444 863 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 DRP2Q13474 957 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SMAD4Q13485 552 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 TARBP2Q15633 366 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SMAD2Q15796 467 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 INF2Q27J81 1249 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms