RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FAM90A27PA6NNH2 459 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 ZNF839A8K0R7 811 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 ACOT7O00154 380 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 PLIN1O60240 522 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 DIAPH1O60610 1272 aaKnown RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 APOL3O95236 402 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 KNG1P01042 644 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CHGBP05060 677 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CT47B1P0C2W7 299 aaPredicted RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 ZNF888P0CJ79 500 aaPredicted RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 CR2P20023 1033 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 POLD1P28340 1107 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 HIBADHP31937 336 aaKnown RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 CGNL1Q0VF96 1302 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CRHR2Q13324 411 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 TESK1Q15569 626 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 USP39Q53GS9 565 aaKnown RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 SOGA3Q5TF21 947 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 NPM2Q86SE8 214 aaKnown RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 C1orf210Q8IVY1 113 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 TTC9BQ8N6N2 239 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 TTLL11Q8NHH1 800 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 PCDH19Q8TAB3 1148 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CALML6Q8TD86 181 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 NEIL1Q96FI4 390 aaPredicted RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 FAM89AQ96GI7 184 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 SCYL1Q96KG9 808 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 GBP4Q96PP9 640 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 PLEKHG4BQ96PX9 1271 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 IFT140Q96RY7 1462 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 DNAJC7Q99615 494 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CCDC113Q9H0I3 377 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 CHMP4BQ9H444 224 aaKnown RBP2.55□□□□□ -2
SNRNP40-207ENST00000491106 GALNT8Q9NY28 637 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 NCDNQ9UBB6 729 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 NPC1L1Q9UHC9 1359 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 WASF3Q9UPY6 502 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 COQ6Q9Y2Z9 468 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 TSC22D4Q9Y3Q8 395 aa2.55□□□□□ -2
SNRNP40-207ENST00000491106 PBRM1Q86U86 1689 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ADGBQ8N7X0 1667 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ITSN2Q9NZM3 1697 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 RAPGEF6Q8TEU7 1601 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 KDM5CP41229 1560 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ATP10BO94823 1461 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 TEX14Q8IWB6 1497 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 PRG4Q92954 1404 aaPredicted RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 GPRASP1Q5JY77 1395 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ZNF521Q96K83 1311 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SLC12A8A0AV02 714 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 APAF1O14727 1248 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 GPR42O15529 346 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 AKAP8O43823 692 aaKnown RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 CUTAO60888 179 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 EFCAB14O75071 495 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 KLHL18O94889 574 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 IL18BPO95998 194 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ACO1P21399 889 aaKnown RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 COMTP21964 271 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 GJA4P35212 333 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 ECE1P42892 770 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SELENOPP49908 381 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 EPHB4P54760 987 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 CD83Q01151 205 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 RASGRF1Q13972 1273 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SPDYAQ5MJ70 313 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 L1TD1Q5T7N2 865 aaKnown RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 KRT40Q6A162 431 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 TCTN3Q6NUS6 607 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 USP30Q70CQ3 517 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 FAM43AQ8N2R8 423 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 OR14K1Q8NGZ2 314 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 Q8TCH9 128 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 GCDHQ92947 438 aaPredicted RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 RUNDC1Q96C34 613 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 AJUBAQ96IF1 538 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 DEPDC7Q96QD5 511 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 GMLQ99445 158 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 DPYSL5Q9BPU6 564 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 CDIP1Q9H305 208 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SEC61A2Q9H9S3 476 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 UPF2Q9HAU5 1272 aaKnown RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 MAGEL2Q9UJ55 1249 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 CBLCQ9ULV8 474 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SYNPO2Q9UMS6 1093 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 SRPK3Q9UPE1 567 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 MRPS23Q9Y3D9 190 aaKnown RBP2.54□□□□□ -2
SNRNP40-207ENST00000491106 TELO2Q9Y4R8 837 aa2.54□□□□□ -2
SNRNP40-207ENST00000491106 WDR62O43379 1518 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 DISP1Q96F81 1524 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ARHGEF12Q9NZN5 1544 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ATP10AO60312 1499 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 NUP153P49790 1475 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 RALGAPBQ86X10 1494 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 PLEKHH2Q8IVE3 1493 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 PTPRGP23470 1445 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 EIF3AQ14152 1382 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 MAPK8IP3Q9UPT6 1336 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms