RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LSG1Q9H089 658 aaKnown RBP23.49■■□□□ 1.35
CLIP2-208ENST00000491075 IRF2BPLQ9H1B7 796 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 GLT8D2Q9H1C3 349 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 ZBTB42B2RXF5 422 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 HOXA2O43364 376 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 FGFR1P11362 822 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 TECP42680 631 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 VCPP55072 806 aaKnown RBP23.48■■□□□ 1.35
CLIP2-208ENST00000491075 FAM189BP81408 668 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 KIZQ2M2Z5 673 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 MIS18BP1Q6P0N0 1132 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 APOA5Q6Q788 366 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 OSMRQ99650 979 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 TCF25Q9BQ70 676 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 TMEM117Q9H0C3 514 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 S1PR5Q9H228 398 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 ENTPD7Q9NQZ7 604 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 WDR81Q562E7 1941 aa23.48■■□□□ 1.35
CLIP2-208ENST00000491075 CACNA1HO95180 2353 aa23.47■■□□□ 1.35
CLIP2-208ENST00000491075 C22orf31O95567 290 aa23.47■■□□□ 1.35
CLIP2-208ENST00000491075 HOXB8P17481 243 aaPredicted RBP23.47■■□□□ 1.35
CLIP2-208ENST00000491075 PPM1AP35813 382 aa23.47■■□□□ 1.35
CLIP2-208ENST00000491075 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
CLIP2-208ENST00000491075 NGRNQ9NPE2 291 aaKnown RBP23.47■■□□□ 1.35
CLIP2-208ENST00000491075 SMCO2A6NFE2 343 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 AVPR2P30518 371 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 CLK2P49760 499 aaKnown RBP23.46■■□□□ 1.35
CLIP2-208ENST00000491075 APOBRQ0VD83 1088 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 DSC3Q14574 896 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 SWSAP1Q6NVH7 229 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 SYCE2Q6PIF2 218 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 ZBTB33Q86T24 672 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 PLA2G4DQ86XP0 818 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 CKAP2LQ8IYA6 745 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 LRRC43Q8N309 656 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 BBXQ8WY36 941 aaPredicted RBP23.46■■□□□ 1.35
CLIP2-208ENST00000491075 SNX27Q96L92 541 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 PPP1R16BQ96T49 567 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 BARHL2Q9NY43 387 aa23.46■■□□□ 1.35
CLIP2-208ENST00000491075 IPO5O00410 1097 aaKnown RBP23.45■■□□□ 1.34
CLIP2-208ENST00000491075 DHX15O43143 795 aaKnown RBP23.45■■□□□ 1.34
CLIP2-208ENST00000491075 GPR32O75388 356 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 VTNP04004 478 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 NECTIN1Q15223 517 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 METTL13Q8N6R0 699 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 ZNF558Q96NG5 402 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 NR2E1Q9Y466 385 aa23.45■■□□□ 1.34
CLIP2-208ENST00000491075 FAM86B1E9PN63 330 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 GFRA3O60609 400 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 FAM86B2P0C5J1 330 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 ATP4AP20648 1035 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 NUBP1P53384 320 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 KRT17Q04695 432 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 FUT2Q10981 343 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 RTN1Q16799 776 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 LLGL2Q6P1M3 1020 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 KCNT2Q6UVM3 1135 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 ABI1Q8IZP0 508 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 CASD1Q96PB1 797 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 FAM86C1Q9NVL1 165 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 CEP131Q9UPN4 1083 aa23.44■■□□□ 1.34
CLIP2-208ENST00000491075 MAFBQ9Y5Q3 323 aaPredicted RBP23.44■■□□□ 1.34
CLIP2-208ENST00000491075 V9GY48 417 aaPredicted RBP23.44■■□□□ 1.34
CLIP2-208ENST00000491075 IGLV3-22A0A075B6J6 115 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 HIDE1A8MVS5 230 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 TPRNQ4KMQ1 711 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 ZNF746Q6NUN9 644 aaPredicted RBP23.43■■□□□ 1.34
CLIP2-208ENST00000491075 SMAP1Q8IYB5 467 aaPredicted RBP23.43■■□□□ 1.34
CLIP2-208ENST00000491075 CASP10Q92851 521 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 ESYT1Q9BSJ8 1104 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 APOL5Q9BWW9 433 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 TBC1D22BQ9NU19 505 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 RNF19AQ9NV58 838 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 TCEAL9Q9UHQ7 104 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 PLXNA3P51805 1871 aa23.43■■□□□ 1.34
CLIP2-208ENST00000491075 ZBTB43O43298 467 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 CYP3A4P08684 503 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 SETQ01105 290 aaPredicted RBP23.42■■□□□ 1.34
CLIP2-208ENST00000491075 LRRC55Q6ZSA7 311 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 TMC7Q7Z402 723 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 ZNF710Q8N1W2 664 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 CRYGNQ8WXF5 182 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 ATOH1Q92858 354 aaPredicted RBP23.42■■□□□ 1.34
CLIP2-208ENST00000491075 RIPOR3Q96MK2 946 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 NECTIN4Q96NY8 510 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 MAP7D2Q96T17 732 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 ZNF577Q9BSK1 485 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 SPG21Q9NZD8 308 aa23.42■■□□□ 1.34
CLIP2-208ENST00000491075 ZFHX2Q9C0A1 2572 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-208ENST00000491075 MAGEB2O15479 319 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 ZSCAN20P17040 1043 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-208ENST00000491075 SP100P23497 879 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-208ENST00000491075 MTMR3Q13615 1198 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 SMC1AQ14683 1233 aaKnown RBP23.41■■□□□ 1.34
CLIP2-208ENST00000491075 RNF20Q5VTR2 975 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 CES5AQ6NT32 575 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 UBALD2Q8IYN6 164 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 KREMEN2Q8NCW0 462 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 FAM167AQ96KS9 214 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 ANO2Q9NQ90 1003 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms