RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 FAM186AA6NE01 2351 aa17.48■□□□□ 0.39
SCAMP3-208ENST00000490999 NFASCO94856 1347 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 ZBTB42B2RXF5 422 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 SH2B2O14492 632 aaPredicted RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 HOXB8P17481 243 aaPredicted RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 FOXK2Q01167 660 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 RARS2Q5T160 578 aaKnown RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 UBALD2Q8IYN6 164 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 LRRC43Q8N309 656 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 C12orf76Q8N812 135 aaPredicted RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 CASP10Q92851 521 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 ZNF668Q96K58 619 aaPredicted RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 ZNF558Q96NG5 402 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 TMEM117Q9H0C3 514 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 MFSD1Q9H3U5 465 aa17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 NGRNQ9NPE2 291 aaKnown RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 PUF60Q9UHX1 559 aaKnown RBP17.47■□□□□ 0.39
SCAMP3-208ENST00000490999 DMXL1Q9Y485 3027 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 GPR182O15218 404 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 MAFGO15525 162 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 C22orf31O95567 290 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 NUBP1P53384 320 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 DSC3Q14574 896 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 TTC22Q5TAA0 569 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 ADAM7Q9H2U9 754 aa17.46■□□□□ 0.39
SCAMP3-208ENST00000490999 IGKV6D-21A0A0A0MT36 114 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 C2orf71A6NGG8 1288 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 HBP1O60381 514 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 CHMLP26374 656 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 PPM1AP35813 382 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 GNAQP50148 359 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 CLCN3P51790 818 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 SMC1AQ14683 1233 aaKnown RBP17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 CEP55Q53EZ4 464 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 CLLU1OSQ5K130 101 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 CWF19L1Q69YN2 538 aaKnown RBP17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 ASTLQ6HA08 431 aaPredicted RBP17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 METTL13Q8N6R0 699 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 FLCNQ8NFG4 579 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 AUTS2Q8WXX7 1259 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 NECTIN4Q96NY8 510 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 ZNF302Q9NR11 478 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 ZNF292O60281 2723 aa17.45■□□□□ 0.38
SCAMP3-208ENST00000490999 COL1A2P08123 1366 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 NT5C1B-RDH14C9J2C7 533 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 CLASP2O75122 1294 aaKnown RBP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 GPR32O75388 356 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ATG7O95352 703 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ATP4AP20648 1035 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 SLC26A2P50443 739 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 METAP2P50579 478 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 FAM189BP81408 668 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ADSSL1Q8N142 457 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 NKD2Q969F2 451 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ELAC1Q9H777 363 aaKnown RBP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 SPG21Q9NZD8 308 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 LIMD1Q9UGP4 676 aa17.44■□□□□ 0.38
SCAMP3-208ENST00000490999 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 EPCAMP16422 314 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 NAPAP54920 295 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 KRT17Q04695 432 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 ITIH3Q06033 890 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 SWSAP1Q6NVH7 229 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 TMEM173Q86WV6 379 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 MRPL43Q8N983 215 aaKnown RBP17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 HELQQ8TDG4 1101 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 RUFY2Q8WXA3 655 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 CNTNAP5Q8WYK1 1306 aa17.43■□□□□ 0.38
SCAMP3-208ENST00000490999 FRYLO94915 3013 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 SGSM2O43147 1006 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 HOXA2O43364 376 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 FGFR4P22455 802 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 ID4P47928 161 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 ZNF484Q5JVG2 852 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms