RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TMOD1P28289 359 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 MRPS5P82675 430 aaKnown RBP35.29■■■■□ 3.24
LDB1-204ENST00000490751 XKR3Q5GH77 459 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 ODR4Q5SWX8 454 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 NPAS4Q8IUM7 802 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 TNFRSF25Q93038 417 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 VAV3Q9UKW4 847 aa35.29■■■■□ 3.24
LDB1-204ENST00000490751 TBC1D8BQ0IIM8 1120 aa35.28■■■■□ 3.24
LDB1-204ENST00000490751 CRIPAKQ8N1N5 446 aa35.28■■■■□ 3.24
LDB1-204ENST00000490751 BANK1Q8NDB2 785 aa35.28■■■■□ 3.24
LDB1-204ENST00000490751 ZNF689Q96CS4 500 aaPredicted RBP35.28■■■■□ 3.24
LDB1-204ENST00000490751 ST3GAL5Q9UNP4 418 aa35.28■■■■□ 3.24
LDB1-204ENST00000490751 LIMCH1Q9UPQ0 1083 aa35.28■■■■□ 3.24
LDB1-204ENST00000490751 EML1O00423 815 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 GPR182O15218 404 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 MMP1P03956 469 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 PPP2R5CQ13362 524 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 BTG3Q14201 252 aaPredicted RBP35.27■■■■□ 3.24
LDB1-204ENST00000490751 TARBP2Q15633 366 aaKnown RBP35.27■■■■□ 3.24
LDB1-204ENST00000490751 MTERF2Q49AM1 385 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 FAM228AQ86W67 206 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 POTEDQ86YR6 584 aa35.27■■■■□ 3.24
LDB1-204ENST00000490751 NIFKQ9BYG3 293 aaKnown RBP35.27■■■■□ 3.24
LDB1-204ENST00000490751 TMEM150BA6NC51 233 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 TBX3O15119 743 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 MGEA5O60502 916 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 STBD1O95210 358 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 STAG3L1P0CL83 205 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 CTNNB1P35222 781 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 NLRP11P59045 1033 aaKnown RBP35.26■■■■□ 3.24
LDB1-204ENST00000490751 GPM6BQ13491 265 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 TRIM29Q14134 588 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 HAS1Q92839 578 aa35.26■■■■□ 3.24
LDB1-204ENST00000490751 H3BNC9 293 aa35.25■■■■□ 3.23
LDB1-204ENST00000490751 MARCH6O60337 910 aa35.25■■■■□ 3.23
LDB1-204ENST00000490751 LINC00271P0C7V0 271 aa35.25■■■■□ 3.23
LDB1-204ENST00000490751 IBSPP21815 317 aaPredicted RBP35.25■■■■□ 3.23
LDB1-204ENST00000490751 PSMC5P62195 406 aa35.25■■■■□ 3.23
LDB1-204ENST00000490751 TFF2Q03403 129 aa35.25■■■■□ 3.23
LDB1-204ENST00000490751 FAM43BQ6ZT52 329 aaPredicted RBP35.25■■■■□ 3.23
LDB1-204ENST00000490751 DIS3L2Q8IYB7 885 aaKnown RBP35.25■■■■□ 3.23
LDB1-204ENST00000490751 BTBD18B2RXH4 712 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 CCDC83Q8IWF9 413 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 ADAM2Q99965 735 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 SH2D3AQ9BRG2 576 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 ADAMTS10Q9H324 1103 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 LRFN2Q9ULH4 789 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 RWDD3Q9Y3V2 267 aa35.24■■■■□ 3.23
LDB1-204ENST00000490751 KIAA1671Q9BY89 1806 aa35.23■■■■□ 3.23
LDB1-204ENST00000490751 DENND3A2RUS2 1198 aa35.23■■■■□ 3.23
LDB1-204ENST00000490751 DDX11L8A8MPP1 907 aa35.23■■■■□ 3.23
LDB1-204ENST00000490751 SARSP49591 514 aaKnown RBP35.23■■■■□ 3.23
LDB1-204ENST00000490751 MRPL38Q96DV4 380 aaKnown RBP35.23■■■■□ 3.23
LDB1-204ENST00000490751 ZNF668Q96K58 619 aaPredicted RBP35.23■■■■□ 3.23
LDB1-204ENST00000490751 KIF2CQ99661 725 aa35.23■■■■□ 3.23
LDB1-204ENST00000490751 COG5Q9UP83 839 aa35.23■■■■□ 3.23
LDB1-204ENST00000490751 SPTBN5Q9NRC6 3674 aaKnown RBP35.23■■■■□ 3.23
LDB1-204ENST00000490751 PTPROQ16827 1216 aa35.22■■■■□ 3.23
LDB1-204ENST00000490751 CMTR2Q8IYT2 770 aaKnown RBP35.22■■■■□ 3.23
LDB1-204ENST00000490751 ZNF710Q8N1W2 664 aa35.22■■■■□ 3.23
LDB1-204ENST00000490751 CLP1Q92989 425 aaKnown RBP35.22■■■■□ 3.23
LDB1-204ENST00000490751 CEP89Q96ST8 783 aa35.22■■■■□ 3.23
LDB1-204ENST00000490751 RGS18Q9NS28 235 aa35.22■■■■□ 3.23
LDB1-204ENST00000490751 C1orf112Q9NSG2 853 aa35.22■■■■□ 3.23
LDB1-204ENST00000490751 C5orf67F2Z3F1 127 aa35.21■■■■□ 3.23
LDB1-204ENST00000490751 BMPR1AP36894 532 aa35.21■■■■□ 3.23
LDB1-204ENST00000490751 QARSP47897 775 aaKnown RBP35.21■■■■□ 3.23
LDB1-204ENST00000490751 GPC3P51654 580 aa35.21■■■■□ 3.23
LDB1-204ENST00000490751 DRP2Q13474 957 aa35.21■■■■□ 3.23
LDB1-204ENST00000490751 IL27Q8NEV9 243 aa35.21■■■■□ 3.23
LDB1-204ENST00000490751 BAG4O95429 457 aaKnown RBP35.2■■■■□ 3.23
LDB1-204ENST00000490751 RB1P06400 928 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 AAK1Q2M2I8 961 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 PAN2Q504Q3 1202 aaKnown RBP35.2■■■■□ 3.23
LDB1-204ENST00000490751 ANO5Q75V66 913 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 SLFN12Q8IYM2 578 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 HLA-CQ95604 372 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 SCLT1Q96NL6 688 aa35.2■■■■□ 3.23
LDB1-204ENST00000490751 MRPL42Q9Y6G3 142 aaKnown RBP35.2■■■■□ 3.23
LDB1-204ENST00000490751 P4HBP07237 508 aaKnown RBP35.19■■■■□ 3.22
LDB1-204ENST00000490751 EIF4BP23588 611 aaKnown RBP35.19■■■■□ 3.22
LDB1-204ENST00000490751 GATMP50440 423 aa35.19■■■■□ 3.22
LDB1-204ENST00000490751 PLA2G4FQ68DD2 849 aa35.19■■■■□ 3.22
LDB1-204ENST00000490751 NCAPH2Q6IBW4 605 aa35.19■■■■□ 3.22
LDB1-204ENST00000490751 SLC24A5Q71RS6 500 aa35.19■■■■□ 3.22
LDB1-204ENST00000490751 PCDHB7Q9Y5E2 793 aa35.19■■■■□ 3.22
LDB1-204ENST00000490751 XIRP2A4UGR9 3374 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 IGKV6-21A0A0C4DH24 114 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 C9IYK1 514 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 DKC1O60832 514 aaKnown RBP eCLIP35.18■■■■□ 3.221e-9■□□□□ 8.9
LDB1-204ENST00000490751 GUCY1B3Q02153 619 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 DSC3Q14574 896 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 EPHA7Q15375 998 aa35.18■■■■□ 3.22
LDB1-204ENST00000490751 LLPHQ9BRT6 129 aaKnown RBP35.18■■■■□ 3.22
LDB1-204ENST00000490751 C11orf84Q9BUA3 381 aaPredicted RBP35.18■■■■□ 3.22
LDB1-204ENST00000490751 WRAP73Q9P2S5 460 aaPredicted RBP35.18■■■■□ 3.22
LDB1-204ENST00000490751 FNDC1Q4ZHG4 1894 aaPredicted RBP35.18■■■■□ 3.22
LDB1-204ENST00000490751 ATG2AQ2TAZ0 1938 aa35.17■■■■□ 3.22
LDB1-204ENST00000490751 SPIRE1Q08AE8 756 aa35.17■■■■□ 3.22
LDB1-204ENST00000490751 TIGD5Q53EQ6 642 aa35.17■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms