RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TRAK2O60296 914 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 FAM13AO94988 1023 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
VARS2-210ENST00000490699 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 INSRRP14616 1297 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 ASIC1P78348 528 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 POSTNQ15063 836 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 GRIK4Q16099 956 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 ECM1Q16610 540 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 ANO5Q75V66 913 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 RSPH3Q86UC2 560 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 ELOA2Q8IYF1 753 aaPredicted RBP12.16□□□□□ -0.46
VARS2-210ENST00000490699 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 KIFAP3Q92845 792 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 MAP7D2Q96T17 732 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 MTRQ99707 1265 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
VARS2-210ENST00000490699 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 PHF24Q9UPV7 400 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
VARS2-210ENST00000490699 HAS3O00219 553 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
VARS2-210ENST00000490699 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
VARS2-210ENST00000490699 IDEP14735 1019 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 SLC12A3P55017 1021 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 PSMC6P62333 389 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 SNW1Q13573 536 aaKnown RBP12.15□□□□□ -0.46
VARS2-210ENST00000490699 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 EMC2Q15006 297 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 PPP2R5AQ15172 486 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 CAVIN1Q6NZI2 390 aaKnown RBP12.15□□□□□ -0.46
VARS2-210ENST00000490699 STXBP4Q6ZWJ1 553 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 METTL13Q8N6R0 699 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 SMARCE1Q969G3 411 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 PAGE5Q96GU1 130 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 RNPEPQ9H4A4 650 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 CLSTN2Q9H4D0 955 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 BLOC1S4Q9NUP1 217 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 KBTBD4Q9NVX7 518 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 COL4A3BPQ9Y5P4 624 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 ARID2Q68CP9 1835 aa12.15□□□□□ -0.46
VARS2-210ENST00000490699 H0YCG3 227 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 M0QZ92 97 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 MAFO75444 373 aaPredicted RBP12.14□□□□□ -0.47
VARS2-210ENST00000490699 GAP43P17677 238 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 CYP11B2P19099 503 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 ATP4AP20648 1035 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 ABCD1P33897 745 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 SMTNP53814 917 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 NPEPPSP55786 919 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 CDC42EP1Q00587 391 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 TFDP1Q14186 410 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 CAMK4Q16566 473 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 CCSAPQ6IQ19 270 aaPredicted RBP12.14□□□□□ -0.47
VARS2-210ENST00000490699 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 KCNK18Q7Z418 384 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 NECAB2Q7Z6G3 386 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 SESTD1Q86VW0 696 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
VARS2-210ENST00000490699 DDX12PQ92771 950 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 KAT2BQ92831 832 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 SCLT1Q96NL6 688 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 C7orf25Q9BPX7 421 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 SUGCTQ9HAC7 445 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 C17orf75Q9HAS0 396 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
VARS2-210ENST00000490699 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
VARS2-210ENST00000490699 A0A087WWV3 80 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 KIF20AO95235 890 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 SCP2P22307 547 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 KLRC1P26715 233 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
VARS2-210ENST00000490699 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
VARS2-210ENST00000490699 MXD4Q14582 209 aaPredicted RBP12.13□□□□□ -0.47
VARS2-210ENST00000490699 IER5Q5VY09 327 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 SASS6Q6UVJ0 657 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 MAEAQ7L5Y9 396 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 STAMQ92783 540 aa12.13□□□□□ -0.47
VARS2-210ENST00000490699 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms