RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 SYT2Q8N9I0 419 aaPredicted RBP22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 RAD54LQ92698 747 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 DPF3Q92784 378 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 TRPV6Q9H1D0 765 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 PLA2G4BP0C869 781 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 NPEPPSP55786 919 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 FAAP100Q0VG06 881 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 MXD4Q14582 209 aaPredicted RBP22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 EMC2Q15006 297 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 ECM1Q16610 540 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 EFCAB12Q6NXP0 572 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 SV2BQ7L1I2 683 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 CEP57L1Q8IYX8 460 aa22.07■■□□□ 1.12
SHROOM3-209ENST00000490690 E9PMD0 336 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 KIAA0355O15063 1070 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 CYP11B2P19099 503 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 SYKP43405 635 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 UBE2HP62256 183 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 USP49Q70CQ1 688 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 FSIP1Q8NA03 581 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 PSPC1Q8WXF1 523 aaKnown RBP22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 KIFAP3Q92845 792 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 DRC1Q96MC2 740 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 CEP89Q96ST8 783 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 TNMDQ9H2S6 317 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 HIPK3Q9H422 1215 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 SUGCTQ9HAC7 445 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 C17orf75Q9HAS0 396 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
SHROOM3-209ENST00000490690 USO1O60763 962 aaKnown RBP22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 SSBP05455 408 aaKnown RBP eCLIP22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 MYL1P05976 194 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 PFKFB1P16118 471 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 GUCY2CP25092 1073 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 ODR4Q5SWX8 454 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 KANK3Q6NY19 840 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 PDILTQ8N807 584 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 TRAPPC12Q8WVT3 735 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 CHAMP1Q96JM3 812 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 PLIN2Q99541 437 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 PDLIM7Q9NR12 457 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 HOOK1Q9UJC3 728 aaKnown RBP22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 HPSEQ9Y251 543 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 LOXHD1Q8IVV2 1947 aa22.05■■□□□ 1.12
SHROOM3-209ENST00000490690 KAT6AQ92794 2004 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 POLR2DO15514 142 aaKnown RBP22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 RAG1P15918 1043 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 SCP2P22307 547 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 RFC2P35250 354 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 SLC12A3P55017 1021 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 TFDP1Q14186 410 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 PPP2R5AQ15172 486 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 ZNF410Q86VK4 478 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 LINC01465Q8N7H1 131 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 PRDM5Q9NQX1 630 aaPredicted RBP22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 ODF2LQ9ULJ1 636 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 AKT3Q9Y243 479 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 PHLPP2Q6ZVD8 1323 aa22.04■■□□□ 1.12
SHROOM3-209ENST00000490690 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 TMEM150BA6NC51 233 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 ZBTB39O15060 712 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 KRT18P05783 430 aaKnown RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 SELPP16109 830 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 PTMSP20962 102 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 THPOP40225 353 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 ZNF200P98182 395 aaPredicted RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 FAM160A1Q05DH4 1040 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 C7orf61Q8IZ16 206 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 USP38Q8NB14 1042 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 DNAJB3Q8WWF6 145 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 DHX58Q96C10 678 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 IFT74Q96LB3 600 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 NOC4LQ9BVI4 516 aaKnown RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 INO80BQ9C086 356 aaPredicted RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 FAM49AQ9H0Q0 323 aaPredicted RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 BLOC1S4Q9NUP1 217 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 SUCLA2Q9P2R7 463 aaPredicted RBP22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 SQORQ9Y6N5 450 aa22.03■■□□□ 1.12
SHROOM3-209ENST00000490690 TIMP1P01033 207 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 SLFN14P0C7P3 912 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 ABCD1P33897 745 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 MRPS6P82932 125 aaKnown RBP22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 HIC1Q14526 733 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 E2F4Q16254 413 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 RINT1Q6NUQ1 792 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 KCNK18Q7Z418 384 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 GPBP1Q86WP2 473 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 KIAA0319LQ8IZA0 1049 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 TMEM199Q8N511 208 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 SLC17A8Q8NDX2 589 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 CTAGE1Q96RT6 745 aa22.02■■□□□ 1.12
SHROOM3-209ENST00000490690 RSPH10B2B2RC85 870 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 TBCAO75347 108 aaKnown RBP22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 PFKMP08237 780 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 RSPH10BP0C881 870 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 CKBP12277 381 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 CLCN3P51790 818 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 POU5F1BQ06416 359 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 PCBP1Q15365 356 aaKnown RBP eCLIP22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 NAALADL2Q58DX5 795 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms