RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NMT2O60551 498 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 SRGAP2BP0DMP2 458 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 ARHGAP8P85298 464 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 TFAP4Q01664 338 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 MGAT3Q09327 533 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 STXBP2Q15833 593 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 PAN2Q504Q3 1202 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 SIX5Q8N196 739 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 TMEM57Q8N5G2 664 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 TDRD5Q8NAT2 981 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 SYTL5Q8TDW5 730 aaPredicted RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 MICAL1Q8TDZ2 1067 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 TAAR1Q96RJ0 339 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 ZNF287Q9HBT7 754 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 DLGAP2Q9P1A6 1054 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 DUSP12Q9UNI6 340 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 STX8Q9UNK0 236 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 USTQ9Y2C2 406 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 MRVI1Q9Y6F6 885 aa8.36□□□□□ -1.07
PDLIM1-203ENST00000490391 KRBA1A5PL33 1030 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 HIDE1A8MVS5 230 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 EIF3JO75822 258 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 FGF18O76093 207 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 LGALS2P05162 132 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 LMNB2Q03252 620 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 ITIH3Q06033 890 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 APOBRQ0VD83 1088 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 PTPRNQ16849 979 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 CCDC96Q2M329 555 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 PLA2G4EQ3MJ16 856 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 PDE12Q6L8Q7 609 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 MAML2Q8IZL2 1156 aaPredicted RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 FAM9BQ8IZU0 186 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 FEZF2Q8TBJ5 459 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 NSUN6Q8TEA1 469 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 OSBP2Q969R2 916 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 SPATA33Q96N06 139 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 IWS1Q96ST2 819 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 BOLA2Q9H3K6 86 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 AGO3Q9H9G7 860 aaKnown RBP8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 SETD4Q9NVD3 440 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 KAT6AQ92794 2004 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 LOXHD1Q8IVV2 1947 aa8.35□□□□□ -1.07
PDLIM1-203ENST00000490391 KALRNO60229 2985 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 SORBS3O60504 671 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 GGPS1O95749 300 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 EOMESO95936 686 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 WEE2P0C1S8 567 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 ATP5JP18859 108 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 UBA1P22314 1058 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 MTHFRP42898 656 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 SP2Q02086 613 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 PTSQ03393 145 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 TDGQ13569 410 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 TPRNQ4KMQ1 711 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 PPM1JQ5JR12 505 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 FBXO47Q5MNV8 452 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 CELF3Q5SZQ8 465 aaKnown RBP8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 PLPP4Q5VZY2 271 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 KIAA1841Q6NSI8 718 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 CES5AQ6NT32 575 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 CEP85Q6P2H3 762 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 FAM174AQ8TBP5 190 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 LMBR1Q8WVP7 490 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 RMDN3Q96TC7 470 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 MAF1Q9H063 256 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 CYP26B1Q9NR63 512 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 PNMA2Q9UL42 364 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 MTMR7Q9Y216 660 aa8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDLIM1-203ENST00000490391 NARSO43776 548 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 KINO60870 393 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 GLULP15104 373 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 CD52P31358 61 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 TDO2P48775 406 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 RUFY4Q6ZNE9 571 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 TSHZ1Q6ZSZ6 1077 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 C1orf210Q8IVY1 113 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 CASP10Q92851 521 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 BCAS3Q9H6U6 928 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 KCNK12Q9HB15 430 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms