RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 C11orf84Q9BUA3 381 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 SSBP3Q9BWW4 388 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 GBP3Q9H0R5 595 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 CGGBP1Q9UFW8 167 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 PCDHB10Q9UN67 800 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 PKD1L3Q7Z443 1732 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 NRAPQ86VF7 1730 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 NWD2Q9ULI1 1742 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 KCPQ6ZWJ8 1503 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 ATP10DQ9P241 1426 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 ADCY9O60503 1353 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 NPHP3-ACAD11A0A0J9YXS1 232 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 IGHDP01880 384 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 FUCA1P04066 466 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 GNAI2P04899 355 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 EPHX1P07099 455 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 RPL13P26373 211 aaKnown RBP5.6□□□□□ -1.51
RBM39-235ENST00000490354 ZNF76P36508 570 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 EIF5P55010 431 aaKnown RBP5.6□□□□□ -1.51
RBM39-235ENST00000490354 AMPD2Q01433 879 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 NEXNQ0ZGT2 675 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 AIMP1Q12904 312 aaKnown RBP5.6□□□□□ -1.51
RBM39-235ENST00000490354 ITPK1Q13572 414 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 PTF1AQ7RTS3 328 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 ADAT2Q7Z6V5 191 aaKnown RBP5.6□□□□□ -1.51
RBM39-235ENST00000490354 STK32CQ86UX6 486 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 MEIS3Q99687 375 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 USP44Q9H0E7 712 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 GZF1Q9H116 711 aaPredicted RBP5.6□□□□□ -1.51
RBM39-235ENST00000490354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.6□□□□□ -1.51
RBM39-235ENST00000490354 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
RBM39-235ENST00000490354 UTYO14607 1347 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 ERVV-1B6SEH8 477 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 NPHS1O60500 1241 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 IGKV5-2P06315 115 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 PIP4K2AP48426 406 aaPredicted RBP5.59□□□□□ -1.51
RBM39-235ENST00000490354 KIAA2012Q0VF49 1180 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 MCTP2Q6DN12 878 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 NPM2Q86SE8 214 aaKnown RBP5.59□□□□□ -1.51
RBM39-235ENST00000490354 LGI4Q8N135 537 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 ARHGEF39Q8N4T4 335 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 FAM26EQ8N5C1 309 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 ANKRD44Q8N8A2 993 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 KYQ8NBH2 561 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 CHST13Q8NET6 341 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 BCL11AQ9H165 835 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 SRRDQ9UH36 339 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 ST6GALNAC2Q9UJ37 374 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 ZBTB1Q9Y2K1 713 aa5.59□□□□□ -1.51
RBM39-235ENST00000490354 PARP4Q9UKK3 1724 aaKnown RBP5.59□□□□□ -1.51
RBM39-235ENST00000490354 GLI3P10071 1580 aa5.59□□□□□ -1.52
RBM39-235ENST00000490354 ZNF536O15090 1300 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 MROH6A6NGR9 719 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 GRM8O00222 908 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 PLSCR1O15162 318 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 SUV39H1O43463 412 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 HMMRO75330 724 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 PPM1BO75688 479 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 NBPF7P0C2Y1 421 aaPredicted RBP5.58□□□□□ -1.52
RBM39-235ENST00000490354 UBTFL1P0CB47 393 aaPredicted RBP5.58□□□□□ -1.52
RBM39-235ENST00000490354 CRKLP46109 303 aaKnown RBP5.58□□□□□ -1.52
RBM39-235ENST00000490354 ATP8B2P98198 1209 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 SLC7A5Q01650 507 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 GRB10Q13322 594 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 TCIRG1Q13488 830 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 GCKRQ14397 625 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 HSP90AB3PQ58FF7 597 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 FAM26FQ5R3K3 315 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 C9orf131Q5VYM1 1079 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 CEP85Q6P2H3 762 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 KIF6Q6ZMV9 814 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 ETV3LQ6ZN32 361 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 LIMS2Q7Z4I7 341 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 SMC5Q8IY18 1101 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 CCDC191Q8NCU4 936 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 PLEKHO2Q8TD55 490 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 MYD88Q99836 296 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 ISCA1Q9BUE6 129 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 C9orf78Q9NZ63 289 aaPredicted RBP5.58□□□□□ -1.52
RBM39-235ENST00000490354 CCNL1Q9UK58 526 aaPredicted RBP5.58□□□□□ -1.52
RBM39-235ENST00000490354 SLC12A7Q9Y666 1083 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 PLCH1Q4KWH8 1693 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 PXDNLA1KZ92 1463 aa5.58□□□□□ -1.52
RBM39-235ENST00000490354 RGPD2P0DJD1 1756 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 RGPD5Q99666 1765 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 MAP3K15Q6ZN16 1313 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 TRBV23OR9-2A0A075B6M9 112 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 SGSM2O43147 1006 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 RPS6KA4O75676 772 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 FANCCQ00597 558 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 MTX1Q13505 466 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 MBLAC2Q68D91 279 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 BORAQ6PGQ7 559 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 CD300LDQ6UXZ3 194 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 DCP2Q8IU60 420 aaKnown RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 TXNDC5Q8NBS9 432 aaKnown RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 KLHL6Q8WZ60 621 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms