RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 FTSJ3Q8IY81 847 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 ACER1Q8TDN7 264 aa7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 SOCS4Q8WXH5 440 aa7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 MIPEPQ99797 713 aa7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 PFASO15067 1338 aa7.71□□□□□ -1.18
PRPF40A-210ENST00000489741 LOC285556D6RIA3 1793 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 TCRBV5S4A2TA0A5A2 114 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 GFRA2O00451 464 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 HOXC6P09630 235 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 USP14P54578 494 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 SLBPQ14493 270 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 NKG7Q16617 165 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 CCL14Q16627 93 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 CERKLQ49MI3 558 aaPredicted RBP7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 ERC1Q8IUD2 1116 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 SIAH1Q8IUQ4 282 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 HRASLS5Q96KN8 279 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 HEXIM2Q96MH2 286 aaKnown RBP7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 BTBD7Q9P203 1132 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 ADGRE2Q9UHX3 823 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 TPX2Q9ULW0 747 aaKnown RBP7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 EXOC6BQ9Y2D4 811 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 SIPA1L1O43166 1804 aa7.7□□□□□ -1.18
PRPF40A-210ENST00000489741 MGAMO43451 1857 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 A0A1W2PRG0 241 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 SLC15A5A6NIM6 579 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 BPNT1O95861 308 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 PGRP06401 933 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 PDE6AP16499 860 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 ZKSCAN1P17029 563 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 VCAM1P19320 739 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 CCND3P30281 292 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 GBP2P32456 591 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 RGS2P41220 211 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 RPL6Q02878 288 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 BNIP3Q12983 259 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 TTF1Q15361 905 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 ABCB5Q2M3G0 1257 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 HSP90AB4PQ58FF6 505 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 SLC9C2Q5TAH2 1124 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 PRAMEF13Q5VWM6 474 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 AACSQ86V21 672 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 RPAP2Q8IXW5 612 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 PANK1Q8TE04 598 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 EDC3Q96F86 508 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 APBA2Q99767 749 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 C11orf49Q9H6J7 331 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 ZBTB40Q9NUA8 1239 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 FLRT1Q9NZU1 646 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 TACC3Q9Y6A5 838 aa7.69□□□□□ -1.18
PRPF40A-210ENST00000489741 SLITRK5O94991 958 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 EOMESO95936 686 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 TAL1P17542 331 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 CCNA1P78396 465 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PRKCQQ04759 706 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PDE4BQ07343 736 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 CAMK2GQ13555 558 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PWP1Q13610 501 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 GRB14Q14449 540 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 SEPT2Q15019 361 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 RAB3GAP1Q15042 981 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 LRIT3Q3SXY7 679 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 KIAA1755Q5JYT7 1200 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 BNC2Q6ZN30 1099 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 SPRED2Q7Z698 418 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 C7orf61Q8IZ16 206 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 MFSD2AQ8NA29 543 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 NPLOC4Q8TAT6 608 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 KIF1BPQ96EK5 621 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 TMEM74Q96NL1 305 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PAGR1Q9BTK6 254 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 IL1RAPL2Q9NP60 686 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 CABP5Q9NP86 173 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 DCP1AQ9NPI6 582 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 ZMYND8Q9ULU4 1186 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PLAGL2Q9UPG8 496 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 MAPK8IP1Q9UQF2 711 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 CUL9Q8IWT3 2517 aa7.68□□□□□ -1.18
PRPF40A-210ENST00000489741 PLXNB2O15031 1838 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 STRNO43815 780 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 CST3P01034 146 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 PF4P02776 101 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 CD96P40200 585 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 MAGEA10P43363 369 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 LMNB2Q03252 620 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 COG2Q14746 738 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 LRRC26Q2I0M4 334 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 LETMD1Q6P1Q0 360 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 FAM214BQ7L5A3 538 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 CLASRPQ8N2M8 674 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms