RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 PDIA5Q14554 519 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 CWF19L1Q69YN2 538 aaKnown RBP10.73□□□□□ -0.69
NOD1-208ENST00000489614 RINLQ6ZS11 566 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 MOB2Q70IA6 237 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 ARHGAP22Q7Z5H3 698 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TMEM139Q8IV31 216 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 ATG4CQ96DT6 458 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 BICD1Q96G01 975 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 EPSTI1Q96J88 318 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 MYH11P35749 1972 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
NOD1-208ENST00000489614 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 SMNDC1O75940 238 aaKnown RBP eCLIP10.73□□□□□ -0.69
NOD1-208ENST00000489614 IMPDH2P12268 514 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TMEM119Q4V9L6 283 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 LRRC23Q53EV4 343 aaPredicted RBP10.73□□□□□ -0.69
NOD1-208ENST00000489614 NIPA1Q7RTP0 329 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 VAV3Q9UKW4 847 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 SOWAHDA6NJG2 315 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 FAM86B1E9PN63 330 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 ATP6V1G1O75348 118 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 ANP32DO95626 131 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 FAM86B2P0C5J1 330 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
NOD1-208ENST00000489614 MAEAQ7L5Y9 396 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 SLC35F6Q8N357 371 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 TRIM58Q8NG06 486 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 MMADHCQ9H3L0 296 aaPredicted RBP10.72□□□□□ -0.69
NOD1-208ENST00000489614 VIPAS39Q9H9C1 493 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 MYO1AQ9UBC5 1043 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 ADGRA2Q96PE1 1338 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 DNM1LO00429 736 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 CCNT1O60563 726 aaKnown RBP10.72□□□□□ -0.69
NOD1-208ENST00000489614 SYKP43405 635 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 COG2Q14746 738 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 ARL8AQ96BM9 186 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 KIAA1468Q9P260 1216 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 MCM3APO60318 1980 aa10.72□□□□□ -0.69
NOD1-208ENST00000489614 NFIBO00712 420 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 ABL1P00519 1130 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 FESP07332 822 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 BCRP11274 1271 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 BMP6P22004 513 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 NCAPHQ15003 741 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 USH1GQ495M9 461 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 CST9Q5W186 159 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 CCDC174Q6PII3 467 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 ZNF473Q8WTR7 871 aaKnown RBP10.71□□□□□ -0.69
NOD1-208ENST00000489614 PNMA5Q96PV4 448 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 SELENOOQ9BVL4 669 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 PIDD1Q9HB75 910 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 ASTN1O14525 1302 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 TRAF5O00463 557 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 RNF8O76064 485 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 LINGO3P0C6S8 592 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 MRPS25P82663 173 aaKnown RBP10.71□□□□□ -0.69
NOD1-208ENST00000489614 FMR1Q06787 632 aaKnown RBP eCLIP10.71□□□□□ -0.69
NOD1-208ENST00000489614 DPYDQ12882 1025 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 ARMC9Q7Z3E5 817 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 FCHSD1Q86WN1 690 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 SYTL5Q8TDW5 730 aaPredicted RBP10.71□□□□□ -0.69
NOD1-208ENST00000489614 TCP11Q8WWU5 503 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 SLC5A5Q92911 643 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 ELP3Q9H9T3 547 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 NOD2Q9HC29 1040 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 UBIAD1Q9Y5Z9 338 aa10.71□□□□□ -0.69
NOD1-208ENST00000489614 AHCYL1O43865 530 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 CCDC175P0C221 793 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 LETM2Q2VYF4 491 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 HIBCHQ6NVY1 386 aaPredicted RBP10.71□□□□□ -0.7
NOD1-208ENST00000489614 OPTNQ96CV9 577 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 CAPZA3Q96KX2 299 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 DISC1Q9NRI5 854 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 KBTBD4Q9NVX7 518 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 BTBD7Q9P203 1132 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 DDX25Q9UHL0 483 aaKnown RBP10.71□□□□□ -0.7
NOD1-208ENST00000489614 RABGAP1Q9Y3P9 1069 aa10.71□□□□□ -0.7
NOD1-208ENST00000489614 GCOM1H8Y6P7 765 aaPredicted RBP10.7□□□□□ -0.7
NOD1-208ENST00000489614 BACH1O14867 736 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 FOXN1O15353 648 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 DIAPH2O60879 1101 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 FLOT1O75955 427 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 POLR2MP0CAP2 368 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 GRB10Q13322 594 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 PCNX4Q63HM2 1172 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 RIOX2Q8IUF8 465 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 OSBPL9Q96SU4 736 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 SERTAD1Q9UHV2 236 aa10.7□□□□□ -0.7
NOD1-208ENST00000489614 CCPG1Q9ULG6 757 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms