RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 RAP1GAPP47736 663 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 BCAR1P56945 870 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 IL13RA1P78552 427 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 HTRA3P83110 453 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 CD83Q01151 205 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 RTP5Q14D33 572 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 CLUL1Q15846 466 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 PTPN21Q16825 1174 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 UGT8Q16880 541 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 ABCB5Q2M3G0 1257 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 UNQ6494/PRO21346Q6UXR6 183 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 CXXC5Q7LFL8 322 aaKnown RBP4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 EAF2Q96CJ1 260 aaPredicted RBP4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 EPB41L4AQ9HCS5 686 aaPredicted RBP4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 KCND1Q9NSA2 647 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 MKS1Q9NXB0 559 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 G3BP2Q9UN86 482 aaKnown RBP4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 SPEF1Q9Y4P9 236 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 ERCC6L2Q5T890 1561 aa4.73□□□□□ -1.65
AC055855.1-201ENST00000489563 MYPNQ86TC9 1320 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 H0Y858 1186 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 PCDH8O95206 1070 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 TSPAN15O95858 294 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 KRT1P04264 644 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 CHGBP05060 677 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 ENPP1P22413 925 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 ADCY8P40145 1251 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 GPR3P46089 330 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 MANFP55145 182 aaKnown RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 MLLT6P55198 1093 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 MAP3K12Q12852 859 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 NFATC3Q12968 1075 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 TTF1Q15361 905 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 KCNA10Q16322 511 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 FSCN1Q16658 493 aaKnown RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 ZBTB41Q5SVQ8 909 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 GRAMD4Q6IC98 578 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 OTOP2Q7RTS6 562 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 KANSL1Q7Z3B3 1105 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 CBARPQ8N350 705 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 POU5F2Q8N7G0 328 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 BHLHE22Q8NFJ8 381 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 ZNF526Q8TF50 670 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 FUBP3Q96I24 572 aaKnown RBP eCLIP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 FAXDC2Q96IV6 333 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 WNT8AQ9H1J5 351 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 MTG2Q9H4K7 406 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 L2HGDHQ9H9P8 463 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 CD320Q9NPF0 282 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 SPATA6Q9NWH7 488 aaPredicted RBP4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 NTMQ9P121 344 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 EDARQ9UNE0 448 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 PPP2R3BQ9Y5P8 575 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 SPATA31D1Q6ZQQ2 1576 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 TNKSO95271 1327 aa4.72□□□□□ -1.65
AC055855.1-201ENST00000489563 DDX3XO00571 662 aaKnown RBP eCLIP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 H2AFYO75367 372 aaKnown RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 KNG1P01042 644 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 LPLP06858 475 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 RPL13P26373 211 aaKnown RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 NEK2P51955 445 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 LINC00310P59036 64 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 MOGSQ13724 837 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 STILQ15468 1287 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 INAVAQ3KP66 663 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 KANK2Q63ZY3 851 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 SAPCD2Q86UD0 394 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 PNMA8AQ86V59 439 aaPredicted RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 C1orf162Q8NEQ5 155 aaPredicted RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 JDP2Q8WYK2 163 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 NOL10Q9BSC4 688 aaKnown RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 QRSL1Q9H0R6 528 aaKnown RBP4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 AASDHPPTQ9NRN7 309 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 DNAJC28Q9NX36 388 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 KCMF1Q9P0J7 381 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 KLHL42Q9P2K6 505 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 FTSJ1Q9UET6 329 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 FBXO10Q9UK96 956 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 CDC42EP3Q9UKI2 254 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 SYNPO2Q9UMS6 1093 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 USP18Q9UMW8 372 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 MRFAP1Q9Y605 127 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 NUMBLQ9Y6R0 609 aa4.71□□□□□ -1.66
AC055855.1-201ENST00000489563 A0A0G2JNJ9 132 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 XPOTO43592 962 aaKnown RBP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 CYP1A1P04798 512 aaPredicted RBP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 MTHFD2P13995 350 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 SARSP49591 514 aaKnown RBP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 EPHB1P54762 984 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 LGALS4P56470 323 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 ACAP2Q15057 778 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 PCBP2Q15366 365 aaKnown RBP eCLIP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 DGKDQ16760 1214 aa4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.66
AC055855.1-201ENST00000489563 VWA3BQ502W6 1294 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms