RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TMEM60Q9H2L4 133 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 RCOR1Q9UKL0 485 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 ATP6V1DQ9Y5K8 247 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 LINC01553A4QN01 128 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 MAGEB2O15479 319 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 CHMP2AO43633 222 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 C22orf31O95567 290 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 YEATS4O95619 227 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ERVK-21P61565 698 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 KRT85P78386 507 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ATP2C1P98194 919 aaPredicted RBP11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 CEBPZQ03701 1054 aaKnown RBP11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 TMEM62Q0P6H9 643 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ZNF174Q15697 407 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 IL17AQ16552 155 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 PPM1EQ8WY54 764 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 ZNF396Q96N95 335 aaPredicted RBP11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 CHD9Q3L8U1 2897 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 PTPRSQ13332 1948 aa11.84□□□□□ -0.51
SCAMP4-208ENST00000489554 MICAL3Q7RTP6 2002 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 RFXAPO00287 272 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 DLL1O00548 723 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 ENPP3O14638 875 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 CCNT1O60563 726 aaKnown RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 UPP2O95045 317 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 OATP04181 439 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 CD52P31358 61 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 MCM7P33993 719 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 PRKCEQ02156 737 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 GRIN1Q05586 938 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 PAK2Q13177 524 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 GRB10Q13322 594 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 CCDC85BQ15834 202 aaPredicted RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 B3GNT9Q6UX72 402 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 HAS1Q92839 578 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 AGO3Q9H9G7 860 aaKnown RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 KCNMB3Q9NPA1 279 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 LMCD1Q9NZU5 365 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 FBXO2Q9UK22 296 aaPredicted RBP11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 MTCH2Q9Y6C9 303 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 COL4A6Q14031 1691 aa11.83□□□□□ -0.52
SCAMP4-208ENST00000489554 TBX3O15119 743 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 ZNF862O60290 1169 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 TMOD1P28289 359 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 PTGDRQ13258 359 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 SKOR2Q2VWA4 1001 aaPredicted RBP11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 SPRED2Q7Z698 418 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 MICALL1Q8N3F8 863 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 METTL13Q8N6R0 699 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 GJA10Q969M2 543 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 LMBRD1Q9NUN5 540 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 CFAP45Q9UL16 551 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 MTUS1Q9ULD2 1270 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 PADI3Q9ULW8 664 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 GINS2Q9Y248 185 aa11.82□□□□□ -0.52
SCAMP4-208ENST00000489554 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 GPR182O15218 404 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 SPTLC2O15270 562 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 NEMFO60524 1076 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 LPXNO60711 386 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 PPP6R2O75170 966 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 RPS6KA5O75582 802 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 MCM4P33991 863 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 UGCGQ16739 394 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 XKR3Q5GH77 459 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 ATXN2LQ8WWM7 1075 aaKnown RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 SCAND2PQ9GZW5 306 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms