RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FBXL21Q9UKT6 434 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 PADI3Q9ULW8 664 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 MBLAC1A4D2B0 266 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 PPP1R11O60927 126 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 TMEM62Q0P6H9 643 aa10.64□□□□□ -0.71
SSBP1-212ENST00000489378 GRIK4Q16099 956 aa10.64□□□□□ -0.71
SSBP1-212ENST00000489378 RARS2Q5T160 578 aaKnown RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 SUMF1Q8NBK3 374 aa10.64□□□□□ -0.71
SSBP1-212ENST00000489378 MRPS27Q92552 414 aaKnown RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
SSBP1-212ENST00000489378 FAM49AQ9H0Q0 323 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 LZTS1Q9Y250 596 aa10.64□□□□□ -0.71
SSBP1-212ENST00000489378 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-212ENST00000489378 SPATA31C2B4DYI2 1134 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 MGEA5O60502 916 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 EOMESO95936 686 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 SP9P0CG40 484 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 MARK3P27448 753 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 MRPS9P82933 396 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 PAK2Q13177 524 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 TDGQ13569 410 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 NEDD9Q14511 834 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 GPATCH3Q96I76 525 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 CWH43Q9H720 699 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 CYP26B1Q9NR63 512 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
SSBP1-212ENST00000489378 DUSP12Q9UNI6 340 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 PCDHB7Q9Y5E2 793 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 DENND4AQ7Z401 1863 aa10.63□□□□□ -0.71
SSBP1-212ENST00000489378 IGSF9BQ9UPX0 1349 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 DCDC2BA2VCK2 349 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 NARSO43776 548 aaKnown RBP10.62□□□□□ -0.71
SSBP1-212ENST00000489378 PBX3P40426 434 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 HAND2P61296 217 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 IGBP1P78318 339 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 PLCB3Q01970 1234 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 ALX1Q15699 326 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 KIAA0319Q5VV43 1072 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 KIAA1841Q6NSI8 718 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 INPP4AQ96PE3 977 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-212ENST00000489378 AMNQ9BXJ7 453 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 RTEL1Q9NZ71 1219 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 PUF60Q9UHX1 559 aaKnown RBP10.62□□□□□ -0.71
SSBP1-212ENST00000489378 PCDHA1Q9Y5I3 950 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 TRPV2Q9Y5S1 764 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 SQORQ9Y6N5 450 aa10.62□□□□□ -0.71
SSBP1-212ENST00000489378 ZFYVE26Q68DK2 2539 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 KRBA1A5PL33 1030 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 FGAP02671 866 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 FGFR1P11362 822 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 LAG3P18627 525 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 TCF7P36402 384 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-212ENST00000489378 LAPTM4AQ15012 233 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 ASPRV1Q53RT3 343 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 ATAT1Q5SQI0 421 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 IER5Q5VY09 327 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 ZC3H14Q6PJT7 736 aaKnown RBP10.61□□□□□ -0.71
SSBP1-212ENST00000489378 TMC7Q7Z402 723 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 TBC1D10CQ8IV04 446 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 MRPL43Q8N983 215 aaKnown RBP10.61□□□□□ -0.71
SSBP1-212ENST00000489378 KCNK12Q9HB15 430 aa10.61□□□□□ -0.71
SSBP1-212ENST00000489378 MAP3K20Q9NYL2 800 aaKnown RBP10.61□□□□□ -0.71
SSBP1-212ENST00000489378 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-212ENST00000489378 FIBPO43427 364 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 DCNP07585 359 aaKnown RBP10.6□□□□□ -0.71
SSBP1-212ENST00000489378 ADRB1P08588 477 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 CFHP08603 1231 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
SSBP1-212ENST00000489378 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 DGKHQ86XP1 1220 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 PI4K2BQ8TCG2 481 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 CHAMP1Q96JM3 812 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 ADAM2Q99965 735 aa10.6□□□□□ -0.71
SSBP1-212ENST00000489378 CELF4Q9BZC1 486 aaKnown RBP10.6□□□□□ -0.71
SSBP1-212ENST00000489378 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 C9IYK1 514 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 GCOM1H8Y6P7 765 aaPredicted RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 M0QZ92 97 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 POLR2MP0CAP2 368 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 EPCAMP16422 314 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 COPS2P61201 443 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 XRRA1Q6P2D8 792 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 KCNT2Q6UVM3 1135 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 TMC5Q6UXY8 1006 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms