RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CYP7B1O75881 506 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 LRG1P02750 347 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 ZBTB48P10074 688 aaPredicted RBP5.73□□□□□ -1.49
XRN1-213ENST00000489241 ATP2A2P16615 1042 aaKnown RBP5.73□□□□□ -1.49
XRN1-213ENST00000489241 LSSP48449 732 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 PUM1Q14671 1186 aaKnown RBP eCLIP5.73□□□□□ -1.49
XRN1-213ENST00000489241 TEPPQ6URK8 271 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 PLEKHH3Q7Z736 793 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 CHTF18Q8WVB6 975 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 CHMP4CQ96CF2 233 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 HOOK2Q96ED9 719 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 LOXL4Q96JB6 756 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 TMEM209Q96SK2 561 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 POLR3GLQ9BT43 218 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 RTFDC1Q9BY42 306 aaPredicted RBP5.73□□□□□ -1.49
XRN1-213ENST00000489241 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 EMC7Q9NPA0 242 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 AASDHPPTQ9NRN7 309 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 KCNH7Q9NS40 1196 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 SPTLC3Q9NUV7 552 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 THG1LQ9NWX6 298 aaKnown RBP5.73□□□□□ -1.49
XRN1-213ENST00000489241 ZIM2Q9NZV7 527 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 TELO2Q9Y4R8 837 aa5.73□□□□□ -1.49
XRN1-213ENST00000489241 PRAMEF25A6NGN4 478 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 K7ESF4 209 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CYP1A1P04798 512 aaPredicted RBP5.72□□□□□ -1.49
XRN1-213ENST00000489241 KPNA1P52294 538 aaPredicted RBP5.72□□□□□ -1.49
XRN1-213ENST00000489241 HERVK_113P62684 666 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 PIN1Q13526 163 aaPredicted RBP5.72□□□□□ -1.49
XRN1-213ENST00000489241 SURF1Q15526 300 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 ATP13A4Q4VNC1 1196 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CPZQ66K79 652 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CREB3L3Q68CJ9 461 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 IQSEC1Q6DN90 963 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CC2D1AQ6P1N0 951 aaPredicted RBP5.72□□□□□ -1.49
XRN1-213ENST00000489241 ZBTB46Q86UZ6 589 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 C11orf74Q86VG3 221 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CCDC146Q8IYE0 955 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CHPFQ8IZ52 775 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
XRN1-213ENST00000489241 DLG3Q92796 817 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 MENTQ9BUN1 341 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 CDH19Q9H159 772 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 PCIF1Q9H4Z3 704 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 L2HGDHQ9H9P8 463 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 VTA1Q9NP79 307 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 SPEF1Q9Y4P9 236 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 ZNF536O15090 1300 aa5.72□□□□□ -1.49
XRN1-213ENST00000489241 KIF3BO15066 747 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 LAMTOR5O43504 91 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 B4GALT3O60512 393 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 FBXO21O94952 628 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 CYP17A1P05093 508 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 ENO2P09104 434 aaPredicted RBP5.71□□□□□ -1.5
XRN1-213ENST00000489241 KIF11P52732 1056 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 ERVK-21P61565 698 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 TMEM132BQ14DG7 1078 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 YTHDC1Q96MU7 727 aaKnown RBP5.71□□□□□ -1.5
XRN1-213ENST00000489241 C8orf49Q96NF6 230 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 C1QTNF3Q9BXJ4 246 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 H2AFY2Q9P0M6 372 aaPredicted RBP5.71□□□□□ -1.5
XRN1-213ENST00000489241 B3GALT1Q9Y5Z6 326 aa5.71□□□□□ -1.5
XRN1-213ENST00000489241 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 C1QTNF3-AMACRE9PGA6 284 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 ACOT7O00154 380 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 C4BPAP04003 597 aaKnown RBP5.7□□□□□ -1.5
XRN1-213ENST00000489241 ZNF20P17024 532 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 SDHAP31040 664 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 ABCB5Q2M3G0 1257 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 INAVAQ3KP66 663 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 VASNQ6EMK4 673 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 GLB1LQ6UWU2 654 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 C14orf80Q86SX3 495 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 ZZZ3Q8IYH5 903 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 MYO1HQ8N1T3 1032 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
XRN1-213ENST00000489241 MBD6Q96DN6 1003 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 SSBP3Q9BWW4 388 aaPredicted RBP5.7□□□□□ -1.5
XRN1-213ENST00000489241 TMEM168Q9H0V1 697 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 TMPRSS5Q9H3S3 457 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 OXSMQ9NWU1 459 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 ARHGAP28Q9P2N2 729 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 CROTQ9UKG9 612 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 SPO11Q9Y5K1 396 aa5.7□□□□□ -1.5
XRN1-213ENST00000489241 FOXP2O15409 715 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 ULK1O75385 1050 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 ABLIM3O94929 683 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 TNFRSF1AP19438 455 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 IL13P35225 146 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 GNALP38405 381 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 MLLT6P55198 1093 aaPredicted RBP5.69□□□□□ -1.5
XRN1-213ENST00000489241 DBPQ10586 325 aaPredicted RBP5.69□□□□□ -1.5
XRN1-213ENST00000489241 HDGFL2Q7Z4V5 671 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms