RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NBPF9Q3BBW0 867 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 SHISA5Q8N114 240 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 NOL10Q9BSC4 688 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 ASCC2Q9H1I8 757 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 FAM86C1Q9NVL1 165 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZNF214Q9UL59 606 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 LAMB1P07942 1786 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 WNT10BO00744 389 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 PRDX5P30044 214 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 HHIPL2Q6UWX4 724 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 CHD1LQ86WJ1 897 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 WNK4Q96J92 1243 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 LNPKQ9C0E8 428 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 TMOD2Q9NZR1 351 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 FBXL21Q9UKT6 434 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 PCDHB10Q9UN67 800 aa9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 COL1A1P02452 1464 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC12-221ENST00000489032 GOLIM4O00461 696 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 IDH1O75874 414 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 GLRX3O76003 335 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 MX1P20591 662 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 CAP1Q01518 475 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 NUCB1Q02818 461 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 TNFAIP1Q13829 316 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 NBPF12Q5TAG4 269 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 TDRD10Q5VZ19 366 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 KIAA1211LQ6NV74 962 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 TMED8Q6PL24 325 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 C6orf15Q6UXA7 325 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 MFSD4AQ8N468 514 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 HEXIM2Q96MH2 286 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZDHHC15Q96MV8 337 aa9.62□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZNF646O15015 1829 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 NAT2P11245 290 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 ITIH2P19823 946 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 GRIK1P39086 918 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 MECOMQ03112 1051 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 TCEAL1Q15170 157 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 DDR2Q16832 855 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 PRSS36Q5K4E3 855 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZSCAN25Q6NSZ9 544 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 SHISA4Q96DD7 197 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 PRMT6Q96LA8 375 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 HAUS7Q99871 368 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 PAG1Q9NWQ8 432 aa9.61□□□□□ -0.87
TRAPPC12-221ENST00000489032 MROH7-TTC4A0A0A0MT08 1334 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 CLRN2A0PK11 232 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 BAG3O95817 575 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 KIF22Q14807 665 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 HEATR6Q6AI08 1181 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 NSUN4Q96CB9 384 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZBED3Q96IU2 234 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 MKNK2Q9HBH9 465 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 PCDHB12Q9Y5F1 795 aa9.6□□□□□ -0.87
TRAPPC12-221ENST00000489032 LAMA3Q16787 3333 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 BTDP43251 543 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 PDE1AP54750 535 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 CLEC16AQ2KHT3 1053 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 TSHZ3Q63HK5 1081 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 APOBEC3HQ6NTF7 200 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 Q7L0L9 218 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 FAM214BQ7L5A3 538 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 DPH6Q7L8W6 267 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 ADAT2Q7Z6V5 191 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 UBE2Q1Q7Z7E8 422 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 FAM181AQ8N9Y4 354 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 CLMNQ96JQ2 1002 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 PTPN18Q99952 460 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 MTMR10Q9NXD2 777 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 ZNF70Q9UC06 446 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 FZD1Q9UP38 647 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 PPP2R3BQ9Y5P8 575 aa9.59□□□□□ -0.87
TRAPPC12-221ENST00000489032 GAKO14976 1311 aa9.58□□□□□ -0.88
TRAPPC12-221ENST00000489032 AOX1Q06278 1338 aa9.58□□□□□ -0.88
TRAPPC12-221ENST00000489032 GPR75-ASB3A0A0A6YYF3 556 aa9.58□□□□□ -0.88
TRAPPC12-221ENST00000489032 C9IYK1 514 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms