RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 PPP6R2O75170 966 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 CTSHP09668 335 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 RFC2P35250 354 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 RARRES1P49788 294 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 CLCN3P51790 818 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 MRPS6P82932 125 aaKnown RBP16.92■□□□□ 0.3
FDPS-213ENST00000489003 MGAT3Q09327 533 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 DRP2Q13474 957 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 HYIQ5T013 277 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 IER5Q5VY09 327 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 DEFB128Q7Z7B8 93 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 CABP7Q86V35 215 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 DHX33Q9H6R0 707 aaKnown RBP16.92■□□□□ 0.3
FDPS-213ENST00000489003 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
FDPS-213ENST00000489003 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
FDPS-213ENST00000489003 RCOR1Q9UKL0 485 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 CFAP45Q9UL16 551 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
FDPS-213ENST00000489003 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
FDPS-213ENST00000489003 E9PMD0 336 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 PARNO95453 639 aaKnown RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 YEATS4O95619 227 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 RPLP2P05387 115 aaKnown RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 TMOD1P28289 359 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 RFC5P40937 340 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 UBA7P41226 1012 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 GRB10Q13322 594 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 ZRSR1Q15695 479 aaKnown RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 TMEM240Q5SV17 173 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 KCNK18Q7Z418 384 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 EXOC8Q8IYI6 725 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 EPSTI1Q96J88 318 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 PLIN2Q99541 437 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 JPH2Q9BR39 696 aaPredicted RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
FDPS-213ENST00000489003 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 TRPV2Q9Y5S1 764 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
FDPS-213ENST00000489003 GPR32O75388 356 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 FGBP02675 491 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 CXCL10P02778 98 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 VTNP04004 478 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 SHHQ15465 462 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 C9orf50Q5SZB4 431 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 TMEM143Q96AN5 459 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.34e-16■■■□□ 14.6
FDPS-213ENST00000489003 CCSER1Q9C0I3 900 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 XPNPEP1Q9NQW7 623 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
FDPS-213ENST00000489003 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
FDPS-213ENST00000489003 DNM3Q9UQ16 869 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 ATP6V1DQ9Y5K8 247 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 TANC1Q9C0D5 1861 aa16.9■□□□□ 0.3
FDPS-213ENST00000489003 SLC26A4O43511 780 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 DGAT1O75907 488 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 EYA4O95677 639 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 DNM2P50570 870 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
FDPS-213ENST00000489003 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 SYMPKQ92797 1274 aaKnown RBP16.89■□□□□ 0.29
FDPS-213ENST00000489003 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 BHMT2Q9H2M3 363 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 AKT3Q9Y243 479 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 SIP14410 1827 aa16.89■□□□□ 0.29
FDPS-213ENST00000489003 NLRP11P59045 1033 aaKnown RBP16.88■□□□□ 0.29
FDPS-213ENST00000489003 LPIN1Q14693 890 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 EMC2Q15006 297 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
FDPS-213ENST00000489003 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 TMEM119Q4V9L6 283 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 AXDND1Q5T1B0 1012 aaPredicted RBP16.88■□□□□ 0.29
FDPS-213ENST00000489003 PADI6Q6TGC4 694 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 KCTD17Q8N5Z5 321 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 CALML4Q96GE6 196 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 CCDC43Q96MW1 224 aaKnown RBP16.88■□□□□ 0.29
FDPS-213ENST00000489003 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 ADAMTS10Q9H324 1103 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 PCDHA7Q9UN72 937 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 GINS2Q9Y248 185 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 SQORQ9Y6N5 450 aa16.88■□□□□ 0.29
FDPS-213ENST00000489003 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 M0QZ92 97 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 CUTAO60888 179 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 PFKMP08237 780 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 CYP11B2P19099 503 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 ARL2P36404 184 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 GPC3P51654 580 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
FDPS-213ENST00000489003 KRT85P78386 507 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 KIZQ2M2Z5 673 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 PLEKHG4Q58EX7 1191 aa16.87■□□□□ 0.29
FDPS-213ENST00000489003 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms