RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 SWSAP1Q6NVH7 229 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 LLGL2Q6P1M3 1020 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 LRRC55Q6ZSA7 311 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 MRPS27Q92552 414 aaKnown RBP12.26□□□□□ -0.45
YIPF3-207ENST00000488966 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 RNF19AQ9NV58 838 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
YIPF3-207ENST00000488966 CDH22Q9UJ99 828 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 LZTS1Q9Y250 596 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
YIPF3-207ENST00000488966 COL1A2P08123 1366 aa12.26□□□□□ -0.45
YIPF3-207ENST00000488966 ST18O60284 1047 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
YIPF3-207ENST00000488966 PBX3P40426 434 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
YIPF3-207ENST00000488966 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 APOA5Q6Q788 366 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 SYNE3Q6ZMZ3 975 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 NIPA1Q7RTP0 329 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 TRMT1LQ7Z2T5 733 aaKnown RBP12.25□□□□□ -0.45
YIPF3-207ENST00000488966 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 METTL13Q8N6R0 699 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 SNX27Q96L92 541 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
YIPF3-207ENST00000488966 CASD1Q96PB1 797 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 TMEM117Q9H0C3 514 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 ELAC1Q9H777 363 aaKnown RBP12.25□□□□□ -0.45
YIPF3-207ENST00000488966 ENTPD7Q9NQZ7 604 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 BRPF3Q9ULD4 1205 aa12.25□□□□□ -0.45
YIPF3-207ENST00000488966 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 GFRA3O60609 400 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 HOXB8P17481 243 aaPredicted RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 CLCN3P51790 818 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 RTN1Q16799 776 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 JAKMIP3Q5VZ66 844 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 KCNT2Q6UVM3 1135 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 CKAP2LQ8IYA6 745 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 CRYGNQ8WXF5 182 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 BBXQ8WY36 941 aaPredicted RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 ZNF558Q96NG5 402 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 PLXNA4Q9HCM2 1894 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 RBM28Q9NW13 759 aaKnown RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
YIPF3-207ENST00000488966 PUF60Q9UHX1 559 aaKnown RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 MAFBQ9Y5Q3 323 aaPredicted RBP12.24□□□□□ -0.45
YIPF3-207ENST00000488966 TRIOO75962 3097 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 KREMEN2Q8NCW0 462 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 ATOH1Q92858 354 aaPredicted RBP12.23□□□□□ -0.45
YIPF3-207ENST00000488966 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 ZNF577Q9BSK1 485 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
YIPF3-207ENST00000488966 FAM217BQ9NTX9 383 aaPredicted RBP12.23□□□□□ -0.45
YIPF3-207ENST00000488966 H0Y858 1186 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ZBTB43O43298 467 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 HOXA2O43364 376 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 CYP3A4P08684 503 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 EIF4BP23588 611 aaKnown RBP12.22□□□□□ -0.45
YIPF3-207ENST00000488966 CDC27P30260 824 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 PPM1AP35813 382 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 NLRP11P59045 1033 aaKnown RBP12.22□□□□□ -0.45
YIPF3-207ENST00000488966 KRT17Q04695 432 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 CLLU1OSQ5K130 101 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
YIPF3-207ENST00000488966 TMC7Q7Z402 723 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 MRPL43Q8N983 215 aaKnown RBP12.22□□□□□ -0.45
YIPF3-207ENST00000488966 RNF169Q8NCN4 708 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 CASP10Q92851 521 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ZNF668Q96K58 619 aaPredicted RBP12.22□□□□□ -0.45
YIPF3-207ENST00000488966 GLT8D2Q9H1C3 349 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 SMOC2Q9H3U7 446 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ANO2Q9NQ90 1003 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 SPG21Q9NZD8 308 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 GABBR1Q9UBS5 961 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 HCFC2Q9Y5Z7 792 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 ZDBF2Q9HCK1 2354 aa12.22□□□□□ -0.45
YIPF3-207ENST00000488966 C2orf71A6NGG8 1288 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 GOLGA8BA8MQT2 603 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 C2CD4DB7Z1M9 353 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 MAGEB2O15479 319 aa12.21□□□□□ -0.45
YIPF3-207ENST00000488966 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms