RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 MFSD4BQ5TF39 518 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 CENPPQ6IPU0 288 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 NCAPG2Q86XI2 1143 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 CCDC13Q8IYE1 715 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 IL31RAQ8NI17 732 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
BEST3-205ENST00000488961 DNAJC7Q99615 494 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 CAPS2Q9BXY5 557 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 TSGA10Q9BZW7 698 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 ATP6V0A4Q9HBG4 840 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 TPX2Q9ULW0 747 aaKnown RBP8.33□□□□□ -1.08
BEST3-205ENST00000488961 SIK3Q9Y2K2 1263 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SAR1BQ9Y6B6 198 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 COL11A2P13942 1736 aaPredicted RBP8.33□□□□□ -1.08
BEST3-205ENST00000488961 NDUFAB1O14561 156 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 UPP2O95045 317 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 OATP04181 439 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SNHG28P0DPA3 235 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 ABCB4P21439 1286 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 ALDH1B1P30837 517 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 HOXD13P35453 343 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SMTNP53814 917 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 EHHADHQ08426 723 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 ARHGAP44Q17R89 818 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 SYDE2Q5VT97 1194 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
BEST3-205ENST00000488961 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 MYCT1Q8N699 235 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 IFT81Q8WYA0 676 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 WNK4Q96J92 1243 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 KIFC3Q9BVG8 833 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 RMI1Q9H9A7 625 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 BLOC1S6Q9UL45 172 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.33□□□□□ -1.08
BEST3-205ENST00000488961 SPATA31A6Q5VVP1 1343 aa8.33□□□□□ -1.08
BEST3-205ENST00000488961 A0A087X0T9 212 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 BICDL2A1A5D9 508 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GOLGA8IPA6NC78 632 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GOLGA6CA6NDK9 693 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GOLGA8JA6NMD2 632 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 NOL4O94818 638 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 RTN3O95197 1032 aaPredicted RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 FAM228BP0C875 321 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GOLGA6DP0CG33 693 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 MYCLP12524 364 aaPredicted RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 ZBED6P86452 979 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 KCNH2Q12809 1159 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 KLHL7Q8IXQ5 586 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 AK8Q96MA6 479 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 MAF1Q9H063 256 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GPRC5CQ9NQ84 441 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GOLGA6AQ9NYA3 693 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 HPCAL4Q9UM19 191 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 A0A1B0GVG6 124 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 NFIBO00712 420 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST3-205ENST00000488961 GUCY2FP51841 1108 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 SLC8A3P57103 927 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 AMPD2Q01433 879 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 KCTD16Q68DU8 428 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 TBC1D31Q96DN5 1066 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 RSRC1Q96IZ7 334 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 AMNQ9BXJ7 453 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 NAA15Q9BXJ9 866 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 RAB34Q9BZG1 259 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 DHX36Q9H2U1 1008 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 ITIH6Q6UXX5 1313 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 POTEB2H3BUK9 544 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 TPD52L2O43399 206 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 KRT86O43790 486 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 AKAP3O75969 853 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 ALAS1P13196 640 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 EIF2AK2P19525 551 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 KLRC1P26715 233 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 CYLC1P35663 651 aaPredicted RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 AARSP49588 968 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST3-205ENST00000488961 SCNN1BP51168 640 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 MAN2A1Q16706 1144 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 SLC27A3Q5K4L6 730 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 GALNT17Q6IS24 598 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 ZNF746Q6NUN9 644 aaPredicted RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 SPATA21Q7Z572 469 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 LENG9Q96B70 501 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 ZDHHC15Q96MV8 337 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 EPAS1Q99814 870 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 EIF2AK1Q9BQI3 630 aaKnown RBP8.32□□□□□ -1.08
BEST3-205ENST00000488961 AP1M1Q9BXS5 423 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 HAUS4Q9H6D7 363 aa8.32□□□□□ -1.08
BEST3-205ENST00000488961 COL4A3BPQ9Y5P4 624 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms