RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 DENND3A2RUS2 1198 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 H3BNC9 293 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 MARCH6O60337 910 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 DGKIO75912 1065 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 SEC24BO95487 1268 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 VTNP04004 478 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 FDPSP14324 419 aaKnown RBP15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 CTNNB1P35222 781 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 CLCN3P51790 818 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 PPP2R5CQ13362 524 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 BTG3Q14201 252 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 UGCGQ16739 394 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 TMEM266Q2M3C6 531 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 TIGD5Q53EQ6 642 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 OXER1Q8TDS5 423 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 GJA10Q969M2 543 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 ZNF689Q96CS4 500 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 MRPL38Q96DV4 380 aaKnown RBP15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 OSMRQ99650 979 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 ERVK-5Q9HDB9 667 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 C1orf112Q9NSG2 853 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 GJB4Q9NTQ9 266 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 NOC2LQ9Y3T9 749 aaKnown RBP15.53■□□□□ 0.08
SPTLC1-207ENST00000488921 MMP1P03956 469 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 RB1P06400 928 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 SARSP49591 514 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 GPM6BQ13491 265 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 CMTR2Q8IYT2 770 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 LRRC71Q8N4P6 559 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 LINC01465Q8N7H1 131 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 TMEM40Q8WWA1 233 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 CLP1Q92989 425 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 HLA-CQ95604 372 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 C11orf84Q9BUA3 381 aaPredicted RBP15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 NIFKQ9BYG3 293 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 ST3GAL5Q9UNP4 418 aa15.52■□□□□ 0.08
SPTLC1-207ENST00000488921 C5orf67F2Z3F1 127 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 GPR32O75388 356 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 NLRP11P59045 1033 aaKnown RBP15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 PSMC5P62195 406 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 CDC42EP1Q00587 391 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 NR5A1Q13285 461 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 MTERF2Q49AM1 385 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 RTN4RL1Q86UN2 441 aaPredicted RBP15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 FAM228AQ86W67 206 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 BANK1Q8NDB2 785 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 SCLT1Q96NL6 688 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 PPP1R16BQ96T49 567 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 JPH2Q9BR39 696 aaPredicted RBP15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 PLVAPQ9BX97 442 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 LMAN2LQ9H0V9 348 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 CDHR5Q9HBB8 845 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 VAV3Q9UKW4 847 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 LIMCH1Q9UPQ0 1083 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 PCDHB7Q9Y5E2 793 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
SPTLC1-207ENST00000488921 EIF4BP23588 611 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 BMPR1AP36894 532 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 QARSP47897 775 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 DNM2P50570 870 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 GPC3P51654 580 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 TARBP2Q15633 366 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 SLC24A5Q71RS6 500 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 DIS3L2Q8IYB7 885 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 EXOC8Q8IYI6 725 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 CRIPAKQ8N1N5 446 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 TNFRSF25Q93038 417 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 ADAM2Q99965 735 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 RGS18Q9NS28 235 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
SPTLC1-207ENST00000488921 TCF20Q9UGU0 1960 aaKnown RBP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 JAK2O60674 1132 aa15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 DTNBO60941 627 aa15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 P4HBP07237 508 aaKnown RBP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 SAFBQ15424 915 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 C8orf34Q49A92 452 aa15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
SPTLC1-207ENST00000488921 PLXNA4Q9HCM2 1894 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 IGKV6-21A0A0C4DH24 114 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 DDX11L8A8MPP1 907 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 MGEA5O60502 916 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 MAFO75444 373 aaPredicted RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 LINC00271P0C7V0 271 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 ZSCAN20P17040 1043 aaPredicted RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 HMGN5P82970 282 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 TFF2Q03403 129 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 EPHA7Q15375 998 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 PAN2Q504Q3 1202 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 NAALADL2Q58DX5 795 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 CCDC83Q8IWF9 413 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms