RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 CENPPQ6IPU0 288 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 DHX40Q8IX18 779 aaKnown RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 ZC3H3Q8IXZ2 948 aaKnown RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 OR6J1Q8NGC5 347 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 HVCN1Q96D96 273 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 MED15Q96RN5 788 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 CBX8Q9HC52 389 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
USP11-209ENST00000488848 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
USP11-209ENST00000488848 BIN1O00499 593 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 PLS3P13797 630 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
USP11-209ENST00000488848 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
USP11-209ENST00000488848 ZNF18P17022 549 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 MYL5Q02045 173 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 STIM1Q13586 685 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 XKR9Q5GH70 373 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
USP11-209ENST00000488848 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
USP11-209ENST00000488848 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 KLHDC9Q8NEP7 349 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 KAT2BQ92831 832 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 HSD3B7Q9H2F3 369 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
USP11-209ENST00000488848 MBLAC1A4D2B0 266 aaPredicted RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 SMTNL1A8MU46 457 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 H0YCG3 227 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 H3BRB1 525 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 PSMA7O14818 248 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 MAGEB2O15479 319 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 HIP1RO75146 1068 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP11-209ENST00000488848 CCNE1P24864 410 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 ARL2P36404 184 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 PRCPP42785 496 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 NPEPPSP55786 919 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 MCCD1P59942 119 aaPredicted RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 SNRPFP62306 86 aaKnown RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 ADAM17P78536 824 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 PAK1Q13153 545 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 EMC2Q15006 297 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 PRAMEF19Q5SWL8 479 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 DYMQ7RTS9 669 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 ZNF720Q7Z2F6 126 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 SLC7A3Q8WY07 619 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 GLG1Q92896 1179 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 KATNAL1Q9BW62 490 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 NFKBIZQ9BYH8 718 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 ARHGAP28Q9P2N2 729 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
USP11-209ENST00000488848 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
USP11-209ENST00000488848 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 BICDL2A1A5D9 508 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 USO1O60763 962 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 FAM13AO94988 1023 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 C22orf31O95567 290 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 RARBP10826 455 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 IDEP14735 1019 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 GTF2BQ00403 316 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 PURAQ00577 322 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 SP4Q02446 784 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 MYBPC2Q14324 1141 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 DHX8Q14562 1220 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 CDKAL1Q5VV42 579 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
USP11-209ENST00000488848 AP5M1Q9H0R1 490 aa11.83□□□□□ -0.52
USP11-209ENST00000488848 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms