RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FAM126BQ8IXS8 530 aa21.54■■□□□ 1.04
CCM2-216ENST00000488727 PNMA5Q96PV4 448 aa21.54■■□□□ 1.04
CCM2-216ENST00000488727 CTAGE1Q96RT6 745 aa21.54■■□□□ 1.04
CCM2-216ENST00000488727 TRMT13Q9NUP7 481 aaKnown RBP21.54■■□□□ 1.04
CCM2-216ENST00000488727 SEPT9Q9UHD8 586 aaPredicted RBP21.54■■□□□ 1.04
CCM2-216ENST00000488727 STK24Q9Y6E0 443 aa21.54■■□□□ 1.04
CCM2-216ENST00000488727 NRCAMQ92823 1304 aa21.54■■□□□ 1.04
CCM2-216ENST00000488727 B4GALT4O60513 344 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 UBA7P41226 1012 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 IGBP1P78318 339 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 GRB10Q13322 594 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 ZRSR1Q15695 479 aaKnown RBP21.53■■□□□ 1.04
CCM2-216ENST00000488727 HYIQ5T013 277 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 MARCH8Q5T0T0 291 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 PLA2G4FQ68DD2 849 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 ANKRD33Q7Z3H0 272 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 ZNF579Q8NAF0 562 aaKnown RBP21.53■■□□□ 1.04
CCM2-216ENST00000488727 PIGOQ8TEQ8 1089 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 ZBTB10Q96DT7 871 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 NIFKQ9BYG3 293 aaKnown RBP21.53■■□□□ 1.04
CCM2-216ENST00000488727 SEZ6LQ9BYH1 1024 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 TRPV6Q9H1D0 765 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 NRBP2Q9NSY0 501 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 KIAA1024Q9UPX6 916 aa21.53■■□□□ 1.04
CCM2-216ENST00000488727 C17orf102A2RUQ5 167 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 PQBP1O60828 265 aaKnown RBP21.52■■□□□ 1.04
CCM2-216ENST00000488727 CAPN15O75808 1086 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 MUTP22033 750 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 TLE2Q04725 743 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 KARSQ15046 597 aaKnown RBP21.52■■□□□ 1.04
CCM2-216ENST00000488727 KCNK18Q7Z418 384 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 KIAA1524Q8TCG1 905 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 PLIN2Q99541 437 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 CCSER1Q9C0I3 900 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 ATP11BQ9Y2G3 1177 aa21.52■■□□□ 1.04
CCM2-216ENST00000488727 NPEPPSP55786 919 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 NOLC1Q14978 699 aaKnown RBP eCLIP21.52■■□□□ 1.03
CCM2-216ENST00000488727 TARBP2Q15633 366 aaKnown RBP21.52■■□□□ 1.03
CCM2-216ENST00000488727 AOPEPQ8N6M6 819 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 LRRC15Q8TF66 581 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 ERCC4Q92889 916 aaPredicted RBP21.52■■□□□ 1.03
CCM2-216ENST00000488727 CEP89Q96ST8 783 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 MROH7Q68CQ1 1323 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 KDM3AQ9Y4C1 1321 aa21.52■■□□□ 1.03
CCM2-216ENST00000488727 COL1A2P08123 1366 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 EVPLQ92817 2033 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 TREHO43280 583 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 CD4P01730 458 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 PTGISQ16647 500 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 DPCR1Q3MIW9 517 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 MTERF2Q49AM1 385 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 TMEM119Q4V9L6 283 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 ZNF484Q5JVG2 852 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 TOX2Q96NM4 488 aa21.51■■□□□ 1.03
CCM2-216ENST00000488727 MBLAC1A4D2B0 266 aaPredicted RBP21.5■■□□□ 1.03
CCM2-216ENST00000488727 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
CCM2-216ENST00000488727 NACC1Q96RE7 527 aa21.5■■□□□ 1.03
CCM2-216ENST00000488727 CYP26B1Q9NR63 512 aa21.5■■□□□ 1.03
CCM2-216ENST00000488727 KCNH3Q9ULD8 1083 aa21.5■■□□□ 1.03
CCM2-216ENST00000488727 A0A087X0B3 334 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 RRN3P2A6NIE6 340 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 E9PMD0 336 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 KRBA2Q6ZNG9 492 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 CALML4Q96GE6 196 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 NT5C3AQ9H0P0 336 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 SLC26A4O43511 780 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 C22orf31O95567 290 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 GNAT1P11488 350 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 PLCG1P19174 1290 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 RARRES1P49788 294 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 XKR9Q5GH70 373 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 OTUD6AQ7L8S5 288 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 CCDC186Q7Z3E2 898 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 DRC7Q8IY82 874 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 WNT8BQ93098 351 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 CDK5RAP3Q96JB5 506 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 CEP170P1Q96L14 293 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 HTATIP2Q9BUP3 242 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 ANKEF1Q9NU02 776 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 FAM13BQ9NYF5 915 aa21.49■■□□□ 1.03
CCM2-216ENST00000488727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.48■■□□□ 1.03
CCM2-216ENST00000488727 DCDC2CA8MYV0 355 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 IKBKBO14920 756 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 CYP2C9P11712 490 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 KLRC1P26715 233 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 RUFY4Q6ZNE9 571 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 SERINC5Q86VE9 423 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 DBR1Q9UK59 544 aaKnown RBP21.48■■□□□ 1.03
CCM2-216ENST00000488727 PYCARDQ9ULZ3 195 aa21.48■■□□□ 1.03
CCM2-216ENST00000488727 SMTNL1A8MU46 457 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 TXLNAP40222 546 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 RASSF8Q8NHQ8 419 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 DHX38Q92620 1227 aaKnown RBP21.47■■□□□ 1.03
CCM2-216ENST00000488727 BHMT2Q9H2M3 363 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 BLOC1S4Q9NUP1 217 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 DNM3Q9UQ16 869 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 NOD1Q9Y239 953 aa21.47■■□□□ 1.03
CCM2-216ENST00000488727 TLR3O15455 904 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms