RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
TTC3-221ENST00000488522 MAFBQ9Y5Q3 323 aaPredicted RBP13.95□□□□□ -0.18
TTC3-221ENST00000488522 WDR81Q562E7 1941 aa13.95□□□□□ -0.18
TTC3-221ENST00000488522 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 GPR32O75388 356 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 FAM86B2P0C5J1 330 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 LAG3P18627 525 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 CRYBB1P53674 252 aaPredicted RBP13.94□□□□□ -0.18
TTC3-221ENST00000488522 ERVFC1P60507 584 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 TCF15Q12870 199 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
TTC3-221ENST00000488522 FAM102BQ5T8I3 360 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 FAM228AQ86W67 206 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 FBXL6Q8N531 539 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
TTC3-221ENST00000488522 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 PGBD1Q96JS3 809 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 LRRC2Q9BYS8 371 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
TTC3-221ENST00000488522 TYW1Q9NV66 732 aaKnown RBP13.94□□□□□ -0.18
TTC3-221ENST00000488522 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 EXOSC10Q01780 885 aaKnown RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 IER5LQ5T953 404 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 MCTP2Q6DN12 878 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 ZNF746Q6NUN9 644 aaPredicted RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 SUGP1Q8IWZ8 645 aaKnown RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 RNF19AQ9NV58 838 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 HCSTQ9UBK5 93 aa13.93□□□□□ -0.18
TTC3-221ENST00000488522 ZFHX2Q9C0A1 2572 aaPredicted RBP13.93□□□□□ -0.18
TTC3-221ENST00000488522 SMCO2A6NFE2 343 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 BACH1O14867 736 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 PER2O15055 1255 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 HOXA2O43364 376 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 PPM1AP35813 382 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 NUBP1P53384 320 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 SETQ01105 290 aaPredicted RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 RTN1Q16799 776 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 ANKRD54Q6NXT1 300 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 MIS18BP1Q6P0N0 1132 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 SYCE2Q6PIF2 218 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 PLA2G4DQ86XP0 818 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 THNSL1Q8IYQ7 743 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 OSMRQ99650 979 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 ATP6V0A4Q9HBG4 840 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
TTC3-221ENST00000488522 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 NID2Q14112 1375 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
TTC3-221ENST00000488522 MAGEB2O15479 319 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 ZBTB43O43298 467 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 FGFR1P11362 822 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
TTC3-221ENST00000488522 SWSAP1Q6NVH7 229 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 LRRC55Q6ZSA7 311 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 CASD1Q96PB1 797 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 CEP131Q9UPN4 1083 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 GINS2Q9Y248 185 aa13.91□□□□□ -0.18
TTC3-221ENST00000488522 V9GY48 417 aaPredicted RBP13.91□□□□□ -0.18
TTC3-221ENST00000488522 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 CIITAP33076 1130 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
TTC3-221ENST00000488522 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
TTC3-221ENST00000488522 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 FAM167AQ96KS9 214 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 IRF2BPLQ9H1B7 796 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
TTC3-221ENST00000488522 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
TTC3-221ENST00000488522 MYO15AQ9UKN7 3530 aa13.89□□□□□ -0.19
TTC3-221ENST00000488522 DDX39AO00148 427 aaKnown RBP13.89□□□□□ -0.19
TTC3-221ENST00000488522 ST18O60284 1047 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms