RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 NEUROG2Q9H2A3 272 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 TBC1D7Q9P0N9 293 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 RXRBP28702 533 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 TMEM266Q2M3C6 531 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
RER1-207ENST00000488353 TMC3Q7Z5M5 1100 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 TBC1D1Q86TI0 1168 aaPredicted RBP15.45■□□□□ 0.06
RER1-207ENST00000488353 ZFPM1Q8IX07 1006 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
RER1-207ENST00000488353 NLRC4Q9NPP4 1024 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 MTMR4Q9NYA4 1195 aa15.45■□□□□ 0.06
RER1-207ENST00000488353 FLT3P36888 993 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 ADCY7P51828 1080 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 ADCY2Q08462 1091 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 ECM1Q16610 540 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 AP1ARQ63HQ0 302 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 RAD54LQ92698 747 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 CEP72Q9P209 647 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 FAM196BA6NMK8 535 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 F8VZ95 297 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 CCDC188H7C350 402 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 ALADP13716 330 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 INHBEP58166 350 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 TCP10Q12799 353 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 TRPM8Q7Z2W7 1104 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 FLAD1Q8NFF5 587 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 AGAP11Q8TF27 550 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 SAMD15Q9P1V8 674 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 FOCADQ5VW36 1801 aa15.44■□□□□ 0.06
RER1-207ENST00000488353 PVALEFA0A1B0GWK0 134 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 CEP104O60308 925 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 MARCH6O60337 910 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.064e-8■■■□□ 16.4
RER1-207ENST00000488353 CCND1P24385 295 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 PEX19P40855 299 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 DHX9Q08211 1270 aaKnown RBP15.43■□□□□ 0.06
RER1-207ENST00000488353 SPDYCQ5MJ68 293 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 MIS18BP1Q6P0N0 1132 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 GUF1Q8N442 669 aaKnown RBP15.43■□□□□ 0.06
RER1-207ENST00000488353 TBC1D5Q92609 795 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 RIOX1Q9H6W3 641 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 PANK4Q9NVE7 773 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 STK17AQ9UEE5 414 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 CORO1CQ9ULV4 474 aaPredicted RBP15.43■□□□□ 0.06
RER1-207ENST00000488353 ANKRD33BA6NCL7 494 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 MPHOSPH10O00566 681 aaKnown RBP15.43■□□□□ 0.06
RER1-207ENST00000488353 LIN7AO14910 233 aaPredicted RBP15.43■□□□□ 0.06
RER1-207ENST00000488353 DAPK3O43293 454 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 TLR2O60603 784 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 KIF4AO95239 1232 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 MMEP08473 750 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 CRKP46108 304 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
RER1-207ENST00000488353 USP11P51784 963 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 LRRC63Q05C16 580 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 HOOK3Q86VS8 718 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 CCDC26Q8TAB7 109 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 KCNMB3Q9NPA1 279 aa15.43■□□□□ 0.06
RER1-207ENST00000488353 PGRMC1O00264 195 aaKnown RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 CHN1P15882 459 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 SHMT1P34896 483 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.06
RER1-207ENST00000488353 KCNMA1Q12791 1236 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 ENOX2Q16206 610 aaKnown RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 SHROOM1Q2M3G4 852 aaPredicted RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 FAM83BQ5T0W9 1011 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 LRRC55Q6ZSA7 311 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.06
RER1-207ENST00000488353 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
RER1-207ENST00000488353 SLITRK6Q9H5Y7 841 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 MYH4Q9Y623 1939 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 GOLGA6L10A0A0M3HER8 536 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 BTNL10A8MVZ5 291 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 H0YIN7 160 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 TRAF5O00463 557 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 HMGB2P26583 209 aaKnown RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 SLC16A2P36021 539 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 TTBK2Q6IQ55 1244 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 SEC14L1Q92503 715 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 ZNF570Q96NI8 536 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 AP1M1Q9BXS5 423 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 DDX47Q9H0S4 455 aaKnown RBP15.42■□□□□ 0.06
RER1-207ENST00000488353 FAM114A2Q9NRY5 505 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
RER1-207ENST00000488353 A0A087X0T9 212 aa15.41■□□□□ 0.06
RER1-207ENST00000488353 DIAPH2O60879 1101 aa15.41■□□□□ 0.06
RER1-207ENST00000488353 FAM228BP0C875 321 aa15.41■□□□□ 0.06
RER1-207ENST00000488353 NOVP48745 357 aa15.41■□□□□ 0.06
RER1-207ENST00000488353 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms