RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 KCNG1Q9UIX4 513 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ST20-MTHFSA0A0A6YYL1 179 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 SH3D21A4FU49 640 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 DBX1A6NMT0 343 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 PRKD3O94806 890 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 KNG1P01042 644 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 CHGBP05060 677 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 ZNF28P17035 718 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 CD83Q01151 205 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 ADCY2Q08462 1091 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 PRR31Q5SQ13 230 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 NECAB2Q7Z6G3 386 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 CARFQ8N187 725 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 ZSCAN18Q8TBC5 510 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 AHCYL2Q96HN2 611 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 PHLDB1Q86UU1 1377 aa5.28□□□□□ -1.56
ECHDC1-217ENST00000488087 MAFGO15525 162 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 KATNA1O75449 491 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 CFPP27918 469 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 ITKQ08881 620 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 MAP3K12Q12852 859 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 MYBPC3Q14896 1274 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 KANK2Q63ZY3 851 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 GRAMD4Q6IC98 578 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 SPOCD1Q6ZMY3 1216 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 CNTD1Q8N815 330 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 SPATA25Q9BR10 227 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 ANO3Q9BYT9 981 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 PUS7LQ9H0K6 701 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 TMEM168Q9H0V1 697 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 SEMA4AQ9H3S1 761 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 VTA1Q9NP79 307 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 TOPORSQ9NS56 1045 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 FBXO10Q9UK96 956 aa5.27□□□□□ -1.57
ECHDC1-217ENST00000488087 WASHC2AQ641Q2 1341 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 GOLGA8AA7E2F4 631 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 GOLGA8BA8MQT2 603 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 PPM1GO15355 546 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 COL6A1P12109 1028 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 BCAR1P56945 870 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 SCAND1P57086 179 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 NFATC3Q12968 1075 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 MOGSQ13724 837 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 STILQ15468 1287 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 RGL3Q3MIN7 710 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 KIAA1841Q6NSI8 718 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 FERMT3Q86UX7 667 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 CXorf67Q86X51 503 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 RPUSD2Q8IZ73 545 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 ADAMTS17Q8TE56 1095 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 ACAP3Q96P50 834 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 C14orf119Q9NWQ9 140 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 CDC42EP3Q9UKI2 254 aa5.26□□□□□ -1.57
ECHDC1-217ENST00000488087 A0A0G2JNJ9 132 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 ELL2O00472 640 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 KLHL18O94889 574 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 PCDH8O95206 1070 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 CLEC2LP0C7M8 214 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 POLD1P28340 1107 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 KCNQ1P51787 676 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 MTMR1Q13613 665 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 PDCD1Q15116 288 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 ZBTB41Q5SVQ8 909 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 CCDC62Q6P9F0 684 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 UNQ6494/PRO21346Q6UXR6 183 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 IFNL2Q8IZJ0 200 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 TP53I13Q8NBR0 393 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 TXNDC5Q8NBS9 432 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 NUDT10Q8NFP7 164 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 NUDT11Q96G61 164 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 YTHDC1Q96MU7 727 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 MTG2Q9H4K7 406 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 BARX1Q9HBU1 254 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 KCMF1Q9P0J7 381 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 Q9UFV3 132 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 MAGEL2Q9UJ55 1249 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 PPP2R3BQ9Y5P8 575 aa5.25□□□□□ -1.57
ECHDC1-217ENST00000488087 CUTAO60888 179 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 HMGCRP04035 888 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 ZSCAN22P10073 491 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 KCNC1P48547 511 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 SLURP1P55000 103 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 MANFP55145 182 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 GJA9P57773 515 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 DGKDQ16760 1214 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 CT83Q5H943 113 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 FAM26FQ5R3K3 315 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 KANSL1Q7Z3B3 1105 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 ZNF761Q86XN6 746 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 SP8Q8IXZ3 490 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 CMIPQ8IY22 773 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 OR5AN1Q8NGI8 311 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms