RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GPR27Q9NS67 375 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 PPARGC1AQ9UBK2 798 aaKnown RBP6.72□□□□□ -1.33
BRCA1-217ENST00000487825 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 CD2APQ9Y5K6 639 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 C10orf71Q711Q0 1435 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 SLIT3O75094 1523 aa6.71□□□□□ -1.33
BRCA1-217ENST00000487825 SBF1O95248 1867 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 DOT1LQ8TEK3 1739 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 SPATA31E1Q6ZUB1 1445 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 TCRBV5S2A0A599 114 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 BLACEA4D250 179 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 CCDC85CA6NKD9 419 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 NOBOXO60393 691 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 TADA3O75528 432 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 ITGA1P56199 1179 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 GJA9P57773 515 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 NKX3-2P78367 333 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 UBXN11Q5T124 520 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 ZNF761Q86XN6 746 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-217ENST00000487825 NGDNQ8NEJ9 315 aaKnown RBP6.71□□□□□ -1.34
BRCA1-217ENST00000487825 ST13P5Q8NFI4 369 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-217ENST00000487825 OSBP2Q969R2 916 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 PRAM1Q96QH2 718 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 NMRK2Q9NPI5 230 aa6.71□□□□□ -1.34
BRCA1-217ENST00000487825 N4BP2Q86UW6 1770 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-217ENST00000487825 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.34
BRCA1-217ENST00000487825 USP6P35125 1406 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
BRCA1-217ENST00000487825 CELA3BP08861 270 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 FGFR1P11362 822 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 SAFB2Q14151 953 aaKnown RBP eCLIP6.7□□□□□ -1.341e-6■□□□□ 10.7
BRCA1-217ENST00000487825 RTP5Q14D33 572 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 NTRK3Q16288 839 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 SKOR2Q2VWA4 1001 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-217ENST00000487825 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 ADAMTS17Q8TE56 1095 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
BRCA1-217ENST00000487825 KCNJ15Q99712 375 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 BDH2Q9BUT1 245 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 TANGO6Q9C0B7 1094 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 MYOTQ9UBF9 498 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 DUSP10Q9Y6W6 482 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 PXDNLA1KZ92 1463 aa6.7□□□□□ -1.34
BRCA1-217ENST00000487825 POLR3AO14802 1390 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-217ENST00000487825 ADGRB1O14514 1584 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 TRAV20A0A0B4J274 112 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 ATP2B1P20020 1258 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 RPL13P26373 211 aaKnown RBP6.69□□□□□ -1.34
BRCA1-217ENST00000487825 EMC4Q5J8M3 183 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 ERICH6BQ5W0A0 696 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 RSPO2Q6UXX9 243 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-217ENST00000487825 SPATC1Q76KD6 591 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 LRRC47Q8N1G4 583 aaKnown RBP6.69□□□□□ -1.34
BRCA1-217ENST00000487825 PIP4K2CQ8TBX8 421 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 DCAF4Q8WV16 495 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 NGRNQ9NPE2 291 aaKnown RBP6.69□□□□□ -1.34
BRCA1-217ENST00000487825 DTLQ9NZJ0 730 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 WDR17Q8IZU2 1322 aa6.69□□□□□ -1.34
BRCA1-217ENST00000487825 UBR3Q6ZT12 1888 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.34
BRCA1-217ENST00000487825 COL6A2P12110 1019 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 CNR2P34972 360 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 PLP2Q04941 152 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-217ENST00000487825 ADAM9Q13443 819 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 MCTP2Q6DN12 878 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 TEPPQ6URK8 271 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 TOM1L2Q6ZVM7 507 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 RBM12BQ8IXT5 1001 aaKnown RBP6.68□□□□□ -1.34
BRCA1-217ENST00000487825 ZSWIM3Q96MP5 696 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 SMOC1Q9H4F8 434 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 SLC6A20Q9NP91 592 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 TFCP2L1Q9NZI6 479 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 PFDN2Q9UHV9 154 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 IGSF1Q8N6C5 1336 aa6.68□□□□□ -1.34
BRCA1-217ENST00000487825 KRIT1O00522 736 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 SLC27A2O14975 620 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 PDPK1O15530 556 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 LRG1P02750 347 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 GCP02774 474 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 GTF2F1P35269 517 aaKnown RBP eCLIP6.67□□□□□ -1.34
BRCA1-217ENST00000487825 RGS19P49795 217 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 GRIN1Q05586 938 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 RGL3Q3MIN7 710 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 ZFYVE27Q5T4F4 411 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 LBX2Q6XYB7 198 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 C16orf71Q8IYS4 520 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-217ENST00000487825 HIRIP3Q9BW71 556 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-217ENST00000487825 SPATA9Q9BWV2 254 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 LNPKQ9C0E8 428 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 C14orf93Q9H972 538 aaKnown RBP6.67□□□□□ -1.34
BRCA1-217ENST00000487825 RBPJLQ9UBG7 517 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 ASH2LQ9UBL3 628 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 MSRB2Q9Y3D2 182 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 PLEKHG2Q9H7P9 1386 aa6.67□□□□□ -1.34
BRCA1-217ENST00000487825 PPIP5K1Q6PFW1 1433 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms