RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MGAMO43451 1857 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 FAM155AB1AL88 458 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GNA14O95837 355 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 OATP04181 439 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GYPCP04921 128 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 NR2F2P24468 414 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 ALCAMQ13740 583 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CELF3Q5SZQ8 465 aaKnown RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 MAMDC4Q6UXC1 1216 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CEP170P1Q96L14 293 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 ERGIC2Q96RQ1 377 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CEP89Q96ST8 783 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 NOC4LQ9BVI4 516 aaKnown RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 KATNBL1Q9H079 304 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GPRC5CQ9NQ84 441 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 XPNPEP1Q9NQW7 623 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 SPTLC3Q9NUV7 552 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 DIS3Q9Y2L1 958 aaKnown RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 K7ENM7 598 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 LGR5O75473 907 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 DGAT1O75907 488 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 TPM2P07951 284 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 TCF7P36402 384 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 KCNJ6P48051 423 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 NCKAP1LP55160 1127 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 RBL2Q08999 1139 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 ADAM9Q13443 819 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 TRIM14Q14142 442 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 PLEKHH3Q7Z736 793 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 TRIM59Q8IWR1 403 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 C17orf53Q8N3J3 647 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 CCDC112Q8NEF3 446 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 SCFD2Q8WU76 684 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 SEPT1Q8WYJ6 367 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 GPR20Q99678 358 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 NIFKQ9BYG3 293 aaKnown RBP10.4□□□□□ -0.74
SF3B1-211ENST00000487698 VTA1Q9NP79 307 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
SF3B1-211ENST00000487698 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.4□□□□□ -0.747e-10■□□□□ 9.8
SF3B1-211ENST00000487698 EMSYQ7Z589 1322 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 KIF3CO14782 793 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 CETN3O15182 167 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 MFAP3LO75121 409 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 NR3C1P04150 777 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 RTP1P59025 263 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TTLL4Q14679 1199 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 HSDL1Q3SXM5 330 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 VWA3BQ502W6 1294 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TAPT1Q6NXT6 567 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TRMT1LQ7Z2T5 733 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 SLC17A8Q8NDX2 589 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 MCPH1Q8NEM0 835 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 KIFAP3Q92845 792 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 MAML3Q96JK9 1138 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TTYH3Q9C0H2 523 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 IKZF4Q9H2S9 585 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 NDST4Q9H3R1 872 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 C17orf75Q9HAS0 396 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 PDGFCQ9NRA1 345 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 CPA4Q9UI42 421 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 AKR1B15C9JRZ8 316 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 SLC16A3O15427 465 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TXNP10599 105 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 FECHP22830 423 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 RPL13P26373 211 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 CASP14P31944 242 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 FXR1P51114 621 aaKnown RBP eCLIP10.39□□□□□ -0.755e-6■■■□□ 17.7
SF3B1-211ENST00000487698 STAT5BP51692 787 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 ADKP55263 362 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 INHBEP58166 350 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 GTF2BQ00403 316 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TBC1D8BQ0IIM8 1120 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TARBP2Q15633 366 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 CCDC40Q4G0X9 1142 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 FAM102BQ5T8I3 360 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 KSR1Q8IVT5 923 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM174Q8WUU8 243 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 DHX33Q9H6R0 707 aaKnown RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 ATP6V0A4Q9HBG4 840 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-211ENST00000487698 KCND1Q9NSA2 647 aa10.39□□□□□ -0.75
SF3B1-211ENST00000487698 RASSF10A6NK89 507 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
SF3B1-211ENST00000487698 ARHGAP1Q07960 439 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 NOLC1Q14978 699 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms