RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 AZI2Q9H6S1 392 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 TUBE1Q9UJT0 475 aa8.1□□□□□ -1.11
UBE4B-209ENST00000487244 REV3LO60673 3130 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 NRCAMQ92823 1304 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 IGSF9BQ9UPX0 1349 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF862O60290 1169 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 PSMD10O75832 226 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 CHRNA1P02708 482 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 RFC2P35250 354 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 RABGGTBP53611 331 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 SMAD3P84022 425 aaKnown RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 KRT76Q01546 638 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 MIS18BP1Q6P0N0 1132 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 PLPPR4Q7Z2D5 763 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 TMCO2Q7Z6W1 182 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 NEK8Q86SG6 692 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 DIS3L2Q8IYB7 885 aaKnown RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 DEFB123Q8N688 67 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 HAS1Q92839 578 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 ZSCAN31Q96LW9 406 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 RIT2Q99578 217 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 LLPHQ9BRT6 129 aaKnown RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 FTOQ9C0B1 505 aaKnown RBP eCLIP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 FAM49AQ9H0Q0 323 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 TTYH1Q9H313 450 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 UPF2Q9HAU5 1272 aaKnown RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF302Q9NR11 478 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 TBC1D22BQ9NU19 505 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 GABBR1Q9UBS5 961 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 DDX25Q9UHL0 483 aaKnown RBP8.09□□□□□ -1.11
UBE4B-209ENST00000487244 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
UBE4B-209ENST00000487244 TMEM150BA6NC51 233 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 WDR64B1ANS9 1081 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 RSPH10B2B2RC85 870 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 KIF28PB7ZC32 967 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 EML1O00423 815 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 CCNT1O60563 726 aaKnown RBP8.08□□□□□ -1.12
UBE4B-209ENST00000487244 CXCL10P02778 98 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 PSAPP07602 524 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 PFKMP08237 780 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 RSPH10BP0C881 870 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 GNAT1P11488 350 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 MYOGP15173 224 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 NDUFV2P19404 249 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 DEFB103AP81534 67 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 PRKCEQ02156 737 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 TRIM29Q14134 588 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 MSS51Q4VC12 460 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 FAM160B1Q5W0V3 765 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 B3GNT9Q6UX72 402 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 SMAP1Q8IYB5 467 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-209ENST00000487244 RPUSD2Q8IZ73 545 aaKnown RBP8.08□□□□□ -1.12
UBE4B-209ENST00000487244 ATP8B4Q8TF62 1192 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 DNAJB3Q8WWF6 145 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 TMX3Q96JJ7 454 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 C8orf76Q96K31 380 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 GUCD1Q96NT3 240 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 TEKT3Q9BXF9 490 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 PBX4Q9BYU1 374 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 KCNMB3Q9NPA1 279 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 MTMR10Q9NXD2 777 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 VAV3Q9UKW4 847 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 YBX2Q9Y2T7 364 aaKnown RBP8.08□□□□□ -1.12
UBE4B-209ENST00000487244 PCDHA10Q9Y5I2 948 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 MAFBQ9Y5Q3 323 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-209ENST00000487244 SLC4A7Q9Y6M7 1214 aa8.08□□□□□ -1.12
UBE4B-209ENST00000487244 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 STBD1O95210 358 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 C22orf31O95567 290 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 GHRP10912 638 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 GCFC2P16383 781 aaKnown RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 ATP2A2P16615 1042 aaKnown RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 KLRC1P26715 233 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 SLC19A1P41440 591 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 SLC26A2P50443 739 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 WDR5P61964 334 aaKnown RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 MGAT3Q09327 533 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 TAF2Q6P1X5 1199 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 CNKSR3Q6P9H4 555 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 MTHFD1LQ6UB35 978 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 MIER3Q7Z3K6 550 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 CKAP2LQ8IYA6 745 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 DBF4BQ8NFT6 615 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 PPP1R16BQ96T49 567 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 SH2D3AQ9BRG2 576 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 NKX2-4Q9H2Z4 354 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms