RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 JAK3P52333 1124 aa15.77■□□□□ 0.11
EPHB4-206ENST00000487222 SERPINI1Q99574 410 aa15.77■□□□□ 0.11
EPHB4-206ENST00000487222 TRIM55Q9BYV6 548 aa15.77■□□□□ 0.11
EPHB4-206ENST00000487222 SNAP23O00161 211 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 SYT2Q8N9I0 419 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 TTC13Q8NBP0 860 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 MAML1Q92585 1016 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 CFAP36Q96G28 342 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 LCMT1Q9UIC8 334 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 ATP5HO75947 161 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 PSMA2P25787 234 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 NUDCD1Q96RS6 583 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 TULP4Q9NRJ4 1543 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 GMNCA6NCL1 334 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 MX2P20592 715 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 TMEM35BQ8NCS4 154 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 HEXIM2Q96MH2 286 aaKnown RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 BARHL2Q9NY43 387 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 PACSIN2Q9UNF0 486 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 COL15A1P39059 1388 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 RASA4BC9J798 803 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 RASA4O43374 803 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 LPXNO60711 386 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 MAGOHP61326 146 aaKnown RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 TMCO4Q5TGY1 634 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 DPP9Q86TI2 863 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 SYNE4Q8N205 404 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 DEPDC1BQ8WUY9 529 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 ATP6V1E2Q96A05 226 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.114e-9■■□□□ 11.9
EPHB4-206ENST00000487222 RPF1Q9H9Y2 349 aaKnown RBP15.76■□□□□ 0.11
EPHB4-206ENST00000487222 ANGPTL3Q9Y5C1 460 aa15.76■□□□□ 0.11
EPHB4-206ENST00000487222 GSG1L2A8MUP6 293 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 ANKRD65E5RJM6 399 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 PRELPP51888 382 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 PPP2R2AP63151 447 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 METTL23Q86XA0 190 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 CRLF3Q8IUI8 442 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 MCPH1Q8NEM0 835 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 N4BP2L2Q92802 583 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 EXOSC10Q01780 885 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 ART3Q13508 389 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 GPR101Q96P66 508 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TAF1DQ9H5J8 278 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TARSL2A2RTX5 802 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 PPFIA2O75334 1257 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 NCF2P19878 526 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 PMS2P54278 862 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 OSTNP61366 133 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TFDP2Q14188 446 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 KCNB1Q14721 858 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 C4orf50Q6ZRC1 276 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 WDR75Q8IWA0 830 aaKnown RBP15.75■□□□□ 0.11
EPHB4-206ENST00000487222 COG1Q8WTW3 980 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TTC25Q96NG3 672 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 NCAPGQ9BPX3 1015 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 TADA3O75528 432 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 CHRNA3P32297 505 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 GCLMP48507 274 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 SIX6OS1Q8N1H7 587 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 KLC2Q9H0B6 622 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 SLITRK6Q9H5Y7 841 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 HDAC6Q9UBN7 1215 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 CAPN11Q9UMQ6 739 aa15.75■□□□□ 0.11
EPHB4-206ENST00000487222 ESYT2A0FGR8 921 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 COPEO14579 308 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 KRT39Q6A163 491 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 PADI6Q6TGC4 694 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.74■□□□□ 0.11
EPHB4-206ENST00000487222 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 ZWILCHQ9H900 591 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 SEL1LQ9UBV2 794 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 FAM187AA6NFU0 413 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 NMT2O60551 498 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 DNAJC8O75937 253 aaPredicted RBP15.74■□□□□ 0.11
EPHB4-206ENST00000487222 GH2P01242 217 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 IQCB1Q15051 598 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 ZNF667Q5HYK9 610 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 SKA2Q8WVK7 121 aaPredicted RBP15.74■□□□□ 0.11
EPHB4-206ENST00000487222 BEGAINQ9BUH8 593 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 DDX47Q9H0S4 455 aaKnown RBP15.74■□□□□ 0.11
EPHB4-206ENST00000487222 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 UTYO14607 1347 aa15.74■□□□□ 0.11
EPHB4-206ENST00000487222 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms